Pre_GI: BLASTP Hits

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Query: NC_011147:2496808:2504053 Salmonella enterica subsp. enterica serovar Paratyphi A str

Start: 2504053, End: 2504490, Length: 438

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain is a clinical isolate collected from a child with paratyphoid fever in Karachi, Pakistan, 2004. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011205:609464:635238635238635675438Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853phage lysozyme1e-80297
NC_006511:2501500:250851725085172508954438Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCClysozyme1e-80297
NC_010067:2529750:258010825801082580548441Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein6e-78288
NC_014228:2270000:228889022888902289330441Xenorhabdus nematophila ATCC 19061, complete genomeGifsy-2 prophage lysozyme7e-31132
NC_014306:3524980:356028135602813560577297Erwinia billingiae Eb661, complete genomeLysozyme7e-29125
NC_015968:3301958:330573533057353306175441Enterobacter asburiae LF7a chromosome, complete genomeglycoside hydrolase family protein9e-29125
NC_017046:2756000:275649427564942756958465Salmonella enterica subsp. enterica serovar Typhimurium str. 798bacteriophage lysozyme4e-28123
NC_011205:1345511:137179213717921372241450Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853phage lysozyme5e-27119
NC_016831:1734292:174137717413771741826450Salmonella enterica subsp. enterica serovar Gallinarum/pullorumputative phage lysozyme5e-27119
NC_011294:1220526:123591912359191236371453Salmonella enterica subsp. enterica serovar Enteritidis strphage lysozyme4e-27119
NC_016816:2953530:296187529618752962300426Pantoea ananatis LMG 5342, complete genomephage lysozyme3e-26117
NC_019907:539749:562889562889563371483Liberibacter crescens BT-1 chromosome, complete genomelysozyme2e-24111
NC_016631:2112175:215241721524172152857441Granulicella mallensis MP5ACTX8 chromosome, complete genomelysozyme1e-23108
NC_019907:845663:849126849126849617492Liberibacter crescens BT-1 chromosome, complete genomebacteriophage lysozyme5e-23106
NC_007712:2028500:204269420426942043134441Sodalis glossinidius str. 'morsitans', complete genomeputative phage lysozyme lysis protein9e-23105
NC_012846:1147000:115919611591961159861666Bartonella grahamii as4aup, complete genomephage related lysozyme2e-22104
NC_010296:5557853:5575711557571155772251515Microcystis aeruginosa NIES-843, complete genomelysozyme5e-2199.8
NC_005956:1019788:102261610226161023281666Bartonella henselae str. Houston-1, complete genomePhage related lysozyme8e-2199
NC_010161:2235500:223941122394112240073663Bartonella tribocorum CIP 105476, complete genomephage-related lysozyme1e-2098.6
NC_010161:1179000:118996111899611190623663Bartonella tribocorum CIP 105476, complete genomephage-related lysozyme3e-2097.4
NC_012846:986877:102041410204141021076663Bartonella grahamii as4aup, complete genomephage related lysozyme4e-2096.7
NC_013282:551219:553855553855554361507Cronobacter turicensis, complete genomeLysozyme4e-2096.7
NC_012808:4098465:410640741064074107018612Methylobacterium extorquens AM1, complete genomePhage-related lysozyme (Muramidase, Endolysin)2e-1994.7
NC_010577:1188438:120892012089201209417498Xylella fastidiosa M23, complete genomeLysozyme6e-1992.8
NC_004556:1178897:119938011993801199991612Xylella fastidiosa Temecula1, complete genomephage-related lysozyme9e-1992
NC_008783:222000:239158239158239820663Bartonella bacilliformis KC583, complete genomephage lysozyme5e-1889.7
NC_014633:99744:101039101039101485447Ilyobacter polytropus DSM 2926 plasmid pILYOP01, complete sequencelysozyme1e-1788.6
NC_012791:2622923:263388026338802634380501Variovorax paradoxus S110 chromosome 1, complete genomeglycoside hydrolase family 241e-1788.2
NC_007963:1582089:158255615825561583029474Chromohalobacter salexigens DSM 3043, complete genomeglycoside hydrolase, family 245e-1786.3
NC_007712:1182518:121514712151471215644498Sodalis glossinidius str. 'morsitans', complete genomephage lysozyme lysis protein8e-1785.9
NC_017323:1644000:165466216546621655126465Sinorhizobium meliloti BL225C plasmid pSINMEB02, complete sequenceglycoside hydrolase family protein1e-1684.7
NC_010681:1325632:132791713279171328444528Burkholderia phytofirmans PsJN chromosome 1, complete sequenceglycoside hydrolase family 243e-1580.5
NC_012559:1497548:150566515056651506129465Laribacter hongkongensis HLHK9, complete genomeLysozyme5e-1579.7
NC_014034:1507047:151977415197741520343570Rhodobacter capsulatus SB1003 chromosome, complete genomephage lysozyme2e-1477.8
NC_010067:2529750:2544273254427325473713099Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein4e-1476.6
NC_012587:3613162:3631222363122236329851764Rhizobium sp. NGR234, complete genomephage-related lysozyme7e-1475.9
NC_012781:2608840:2620463262046326228472385Eubacterium rectale ATCC 33656, complete genomeputative phage-related lysozyme7e-1475.9
NC_008570:2216736:225395222539522254443492Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genomephage lysozyme9e-1475.5
NC_012559:1663214:167279816727981673262465Laribacter hongkongensis HLHK9, complete genomeLysozyme1e-1375.1
NC_007712:1516589:154075015407501541226477Sodalis glossinidius str. 'morsitans', complete genomephage lysozyme lysis protein2e-1374.3
NC_011083:374000:393293393293393796504Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,phage lysozyme5e-1373.2
NC_009778:2993218:300551030055103006004495Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein7e-1372.4
NC_010554:539122:544072544072544542471Proteus mirabilis HI4320, complete genomephage lysozome1e-1271.6
NC_011751:643976:663288663288663785498Escherichia coli UMN026 chromosome, complete genomeputative lysozyme; DLP12 prophage2e-1271.2
NC_011740:2769961:277569627756962776193498Escherichia fergusonii ATCC 35469, complete genomeputative lysozyme; DLP12 prophage2e-1270.9
NC_015663:4767443:477342247734224773925504Enterobacter aerogenes KCTC 2190 chromosome, complete genomelysozyme-like protein3e-1270.5
NC_015224:2095816:210804621080462108501456Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,bacteriophage lysozyme3e-1270.5
NC_007712:2287053:230171723017172302202486Sodalis glossinidius str. 'morsitans', complete genomephage lysozyme lysis protein7e-1269.3
NC_015422:2126614:213585421358542136354501Alicycliphilus denitrificans K601 chromosome, complete genomeglycoside hydrolase family 247e-1269.3
NC_012751:409333:413042413042413407366Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum), completephage lysozyme1e-1168.6
NC_013364:2898964:290789729078972908394498Escherichia coli O111:H- str. 11128, complete genomeputative endolysin1e-1168.6
NC_013282:3389619:338961933896193390071453Cronobacter turicensis, complete genomehypothetical protein2e-1168.2
NC_020211:2094500:210989121098912110385495Serratia marcescens WW4, complete genomeputative lysozyme, DLP12 prophage2e-1168.2
NC_010943:1884695:190193619019361902439504Stenotrophomonas maltophilia K279a, complete genomeputative glycosidase2e-1168.2
NC_007712:2649940:266023226602322660717486Sodalis glossinidius str. 'morsitans', complete genomephage lysozyme lysis protein2e-1168.2
NC_008800:2013450:202200720220072022489483Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,bacteriophage lysozyme1e-1168.2
NC_020418:2084937:209663520966352097111477Morganella morganii subsp. morganii KT, complete genomeLysozyme1e-1168.2
NC_009783:1956000:197368919736891974168480Vibrio harveyi ATCC BAA-1116 chromosome I, complete sequencehypothetical protein1e-1168.2
NC_013361:3112023:311794331179433118440498Escherichia coli O26:H11 str. 11368 chromosome, complete genomeendolysin2e-1167.8
NC_011415:1472500:149690314969031497400498Escherichia coli SE11 chromosome, complete genomeputative phage lysozyme3e-1167.4
NC_020409:1328875:1339092133909213405311440Desulfovibrio piezophilus str. nov C1TLV30 chromosome, completeputative Lysozyme3e-1167.4
NC_007946:1239278:125842812584281258925498Escherichia coli UTI89, complete genomeprobable lysozyme from lambdoid prophage DLP122e-1167.4
NC_008563:1175035:119581511958151196312498Escherichia coli APEC O1, complete genomebacteriophage lambda lysozyme-like protein2e-1167.4
NC_011742:1177946:119933711993371199834498Escherichia coli S88 chromosome, complete genomelysozyme; DLP12 prophage2e-1167.4
NC_013941:699286:715761715761716258498Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeLysozyme2e-1167.4
NC_000913:558920:576836576836577333498Escherichia coli K12, complete genomeDLP12 prophage; predicted lysozyme4e-1167
NC_010473:498252:516168516168516665498Escherichia coli str. K-12 substr. DH10B, complete genomeDLP12 prophage; predicted lysozyme4e-1167
AC_000091:558920:576836576836577333498Escherichia coli W3110 DNA, complete genomepredicted lysozyme4e-1167
NC_010473:623810:629428629428629925498Escherichia coli str. K-12 substr. DH10B, complete genomeDLP12 prophage; predicted lysozyme4e-1167
NC_012759:461680:479596479596480093498Escherichia coli BW2952 chromosome, complete genomeDLP12 prophage; putative lysozyme4e-1167
NC_007384:2933625:293362529336252934122498Shigella sonnei Ss046, complete genomelysozyme-like protein4e-1167
NC_007712:2806500:280841428084142808863450Sodalis glossinidius str. 'morsitans', complete genomephage lysozyme lysis protein3e-1167
NC_012967:531000:549082549082549579498Escherichia coli B str. REL606 chromosome, complete genomeputative lysozyme3e-1167
NC_012947:3231893:323610032361003236597498Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completeLysozyme3e-1167
NC_008563:1475500:148441314844131484910498Escherichia coli APEC O1, complete genomephage-related lysozyme (muraminidase)3e-1167
NC_011094:593100:618243618243618740498Salmonella enterica subsp. enterica serovar Schwarzengrund strphage lysozyme3e-1167
NC_011740:2072173:210083821008382101335498Escherichia fergusonii ATCC 35469, complete genomeputative lysozyme; DLP12 prophage3e-1167
NC_017047:4037674:405941740594174059926510Rahnella aquatilis HX2 chromosome, complete genomeglycoside hydrolase4e-1166.6
NC_020064:871338:892417892417892929513Serratia marcescens FGI94, complete genomephage-related lysozyme (muraminidase)5e-1166.6
NC_016845:1773416:179120917912091791718510Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,hypothetical protein7e-1166.2
NC_021066:2226826:223273422327342233231498Raoultella ornithinolytica B6, complete genomephage lysozyme6e-1166.2
CU928145:824367:838503838503839000498Escherichia coli 55989 chromosome, complete genomeputative lysozyme; DLP12 prophage6e-1166.2
NC_011748:824367:838503838503839000498Escherichia coli 55989, complete genomeputative lysozyme; DLP12 prophage6e-1166.2
NC_012559:1888000:189976318997631900077315Laribacter hongkongensis HLHK9, complete genomeLysozyme9e-1165.9
NC_016514:2476359:249661224966122497106495Enterobacter cloacae EcWSU1 chromosome, complete genomelysozyme from lambdoid prophage DLP122e-1064.7
NC_014121:3627588:365936736593673659861495Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completephage lysozyme3e-1063.5
NC_014774:171500:175568175568176017450Candidatus Liberibacter solanacearum CLso-ZC1 chromosome, completephage-related lysozyme4e-1063.5
NC_020260:312805:334938334938335453516Cronobacter sakazakii Sp291, complete genomeFels-2 prophage: prophage lysozyme4e-1063.2
NC_011283:3379181:340580434058043406307504Klebsiella pneumoniae 342 chromosome, complete genomephage lysozyme5e-1063.2
NC_020211:4598217:459821745982174598729513Serratia marcescens WW4, complete genomephage lysozyme9e-1062.4
NC_009049:627000:643763643763644392630Rhodobacter sphaeroides ATCC 17029 chromosome 1, complete sequencePhage-related lysozyme (muraminidase)-like9e-1062.4
NC_013361:1754346:175917817591781759711534Escherichia coli O26:H11 str. 11368 chromosome, complete genomeendolysin9e-1062.4
NC_013850:1887556:191084719108471911350504Klebsiella variicola At-22 chromosome, complete genomeLysozyme1e-0962
NC_015061:1598920:162245316224531622962510Rahnella sp. Y9602 chromosome, complete genomeglycoside hydrolase family 242e-0961.2
NC_013008:2910567:291507929150792915612534Escherichia coli O157:H7 str. TW14359 chromosome, complete genomeendolysin R of prophage CP-933V2e-0960.8
NC_014837:3766426:376695137669513767466516Pantoea sp. At-9b chromosome, complete genomeglycoside hydrolase family 243e-0960.8
NC_011149:2802199:280219928021992802708510Salmonella enterica subsp. enterica serovar Agona str. SL483,phage lysozyme5e-0960.1
NC_013941:5317424:532577753257775326310534Escherichia coli O55:H7 str. CB9615 chromosome, complete genomephage lysozyme4e-0960.1
NC_003919:1203405:122088012208801221329450Xanthomonas axonopodis pv. citri str. 306, complete genomephage-related lysozyme4e-0960.1
NC_003198:4453457:448902044890204489490471Salmonella enterica subsp. enterica serovar Typhi str. CT18,putative lysozyme4e-0960.1
NC_016816:1970189:199283819928381993326489Pantoea ananatis LMG 5342, complete genomephage lysozyme4e-0960.1
NC_011748:1408280:142932114293211429854534Escherichia coli 55989, complete genomeputative membrane-associated lysozyme; Qin prophage4e-0960.1
CU928145:1408280:142932114293211429854534Escherichia coli 55989 chromosome, complete genomeputative membrane-associated lysozyme; Qin prophage4e-0960.1
NC_002695:1929215:194461419446141945147534Escherichia coli O157:H7 str. Sakai, complete genomeputative endolysin6e-0959.7
NC_013892:274297:2899912899912930623072Xenorhabdus bovienii SS-2004 chromosome, complete genomeRhs accessory genetic element5e-0959.7
NC_008563:5011997:502095850209585021491534Escherichia coli APEC O1, complete genomeQin prophage; predicted lysozyme5e-0959.7
NC_009800:1657550:166858416685841669117534Escherichia coli HS, complete genomephage lysozyme5e-0959.7
NC_004431:3040953:304975430497543050287534Escherichia coli CFT073, complete genomeProbable lysozyme from lambdoid prophage Qin5e-0959.7
NC_011742:4962008:497096849709684971501534Escherichia coli S88 chromosome, complete genomemembrane-associated lysozyme; Qin prophage5e-0959.7
NC_012967:1593101:161171816117181612251534Escherichia coli B str. REL606 chromosome, complete genomeputative lysozyme5e-0959.7
CU928145:1773642:178287717828771783410534Escherichia coli 55989 chromosome, complete genomeputative membrane-associated lysozyme; Qin prophage5e-0959.7
NC_011748:1773642:178287717828771783410534Escherichia coli 55989, complete genomeputative membrane-associated lysozyme; Qin prophage5e-0959.7
NC_003198:4453457:44737534473753450773033978Salmonella enterica subsp. enterica serovar Typhi str. CT18,5e-0959.7
NC_011740:4520373:452843745284374528970534Escherichia fergusonii ATCC 35469, complete genomeputative membrane-associated lysozyme; Qin prophage7e-0959.3
NC_012947:2366000:237782223778222378355534Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completeLysozyme9e-0958.9
NC_012967:1403733:141753014175301418063534Escherichia coli B str. REL606 chromosome, complete genomeputative lysozyme9e-0958.9
NC_007613:761234:778873778873779385513Shigella boydii Sb227, complete genomeputative lysozyme protein R of prophage CP-933K9e-0958.9
NC_007954:3887488:389079138907913891270480Shewanella denitrificans OS217, complete genomeglycoside hydrolase, family 241e-0858.5
NC_016818:1605918:162641916264191626928510Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completephage-related lysozyme (muraminidase)2e-0858.2
NC_017047:1551836:157316815731681573677510Rahnella aquatilis HX2 chromosome, complete genomeputative lysozyme from lambdoid prophage DLP122e-0858.2
NC_020260:1615135:163303316330331633518486Cronobacter sakazakii Sp291, complete genomehypothetical protein3e-0857.4
NC_020181:2097066:210213521021352102668534Enterobacter aerogenes EA1509E, complete genomePhage lysin3e-0857
NC_009778:1556222:157412115741211574609489Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein3e-0857
NC_014720:2420455:2429353242935324306181266Caldicellulosiruptor kronotskyensis 2002 chromosome, completeglycoside hydrolase family 244e-0857
NC_017033:1052000:107320510732051073681477Frateuria aurantia DSM 6220 chromosome, complete genomephage-related lysozyme (muraminidase)5e-0856.6
NC_011353:2957962:295961729596172960150534Escherichia coli O157:H7 str. EC4115 chromosome, complete genomelysozyme4e-0856.6
NC_009792:1770106:177425717742571774787531Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein8e-0855.8
NC_010674:2328307:233068823306882331488801Clostridium botulinum B str. Eklund 17B, complete genomeputative phage lysozyme1e-0755.1
NC_014562:2871765:287256628725662873075510Pantoea vagans C9-1 chromosome, complete genomeputative lysozyme2e-0754.3
NC_010674:1986000:198708519870851987876792Clostridium botulinum B str. Eklund 17B, complete genomecollagenolytic protease2e-0754.3
NC_016612:3803130:382579838257983826328531Klebsiella oxytoca KCTC 1686 chromosome, complete genomeputative endolysin R of prophage CP-933V4e-0753.5
NC_012724:1781554:1790941179094117926561716Burkholderia glumae BGR1 chromosome 1, complete genomePeptidoglycan-binding LysM4e-0753.5
NC_014625:1187608:119310411931041193646543Ketogulonicigenium vulgare Y25 chromosome, complete genomelysozyme4e-0753.5
NC_016845:1285435:130558313055831306113531Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,hypothetical protein5e-0753.1
NC_010625:229478:2458292458292475441716Burkholderia phymatum STM815 plasmid pBPHY01, complete sequencePeptidoglycan-binding LysM7e-0752.8
NC_016845:2274500:229637722963772296907531Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,hypothetical protein9e-0752.4
NC_014774:605085:611929611929612237309Candidatus Liberibacter solanacearum CLso-ZC1 chromosome, completephage-related lysozyme1e-0652
NC_011365:592256:632888632888633166279Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genomelysozyme2e-0651.6
NC_014355:1865003:189263318926331893430798Candidatus Nitrospira defluvii, complete genomehypothetical protein2e-0651.2
NC_014834:3130715:316288031628803163509630Rhodopseudomonas palustris DX-1 chromosome, complete genomeglycoside hydrolase family protein9e-0648.9