Pre_GI: BLASTP Hits

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Query: NC_011147:2496808:2507713 Salmonella enterica subsp. enterica serovar Paratyphi A str

Start: 2507713, End: 2508159, Length: 447

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain is a clinical isolate collected from a child with paratyphoid fever in Karachi, Pakistan, 2004. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_006511:2501500:251217725121772512623447Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCChypothetical protein8e-82301
NC_013364:1183000:119837811983781198911534Escherichia coli O111:H- str. 11128, complete genomehypothetical protein5e-77285
NC_013361:1558423:157471215747121575245534Escherichia coli O26:H11 str. 11368 chromosome, complete genomehypothetical protein5e-77285
NC_013364:2645438:264744426474442647890447Escherichia coli O111:H- str. 11128, complete genomehypothetical protein4e-76282
NC_002655:1332961:134720813472081347654447Escherichia coli O157:H7 EDL933, complete genomeunknown protein encoded by bacteriophage BP-933W7e-76281
NC_013361:3112023:312648431264843126930447Escherichia coli O26:H11 str. 11368 chromosome, complete genomehypothetical protein6e-74275
NC_011601:1039500:105553310555331055979447Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomeprotein NinB1e-72271
NC_015663:4522109:453126145312614531710450Enterobacter aerogenes KCTC 2190 chromosome, complete genomeNinB family protein5e-35146
NC_015663:4767443:477606547760654776514450Enterobacter aerogenes KCTC 2190 chromosome, complete genomeNinB family protein5e-35146
NC_011283:4212000:421354542135454214012468Klebsiella pneumoniae 342 chromosome, complete genomeninB protein1e-31135
NC_014306:3524980:356371235637123564143432Erwinia billingiae Eb661, complete genomephage NinB protein8e-31132
NC_008570:2216736:224629022462902246730441Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genomeNinB protein1e-26118
NC_016860:364981:383394383394383831438Salmonella enterica subsp. enterica serovar Typhimurium strrecombination protein ninB from phage origin1e-23108
NC_011601:2614691:261575026157502616190441Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomeprotein NinB6e-23106
NC_012759:4132527:414624541462454146685441Escherichia coli BW2952 chromosome, complete genomeProtein ninB6e-23106
NC_011742:1177946:119458811945881195046459Escherichia coli S88 chromosome, complete genomerecombination protein ninB from phage origin6e-23106
NC_007946:1239278:125369712536971254137441Escherichia coli UTI89, complete genomeputative NinB protein encoded within prophage5e-23106
NC_009800:289000:305342305342305782441Escherichia coli HS, complete genomeputative ninB protein5e-23106
NC_004431:1401681:141716214171621417602441Escherichia coli CFT073, complete genomeUnknown protein encoded within prophage5e-23106
NC_008563:1175035:119108411910841191524441Escherichia coli APEC O1, complete genomehypothetical protein5e-23106
NC_013941:975353:992646992646993086441Escherichia coli O55:H7 str. CB9615 chromosome, complete genomehypothetical protein5e-23106
NC_017328:303987:321809321809322249441Shigella flexneri 2002017 chromosome, complete genomeProtein ninB5e-23106
NC_007946:2625461:262598426259842626424441Escherichia coli UTI89, complete genomehypothetical protein1e-22105
NC_011601:717072:735071735071735511441Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomeprotein NinB8e-23105
NC_011751:1405381:142258614225861423044459Escherichia coli UMN026 chromosome, complete genomerecombination protein ninB from phage origin6e-23105
NC_011205:609464:631320631320631778459Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853ninB protein4e-22103
NC_014121:3627588:366413436641343664544411Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completeputative ninB protein3e-1684
NC_011740:2072173:210537121053712105787417Escherichia fergusonii ATCC 35469, complete genomeputative ninB protein5e-1476.6
NC_009778:2993218:301049330104933010903411Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein1e-1375.1
NC_009567:904922:908461908461908877417Haemophilus influenzae PittGG chromosome, complete genomehypothetical protein3e-1374.3
NC_014922:825396:845110845110845526417Haemophilus influenzae F3047 chromosome, complete genomerecombination protein NinB3e-1374.3
NC_013361:3287671:329048132904813290891411Escherichia coli O26:H11 str. 11368 chromosome, complete genomerecombination protein2e-1374.3
NC_013282:1200993:122082112208211221231411Cronobacter turicensis, complete genomehypothetical protein4e-1373.6
NC_002927:2338549:234788923478892348296408Bordetella bronchiseptica RB50, complete genomehypothetical protein1e-1271.6
NC_007712:1219957:124413012441301244570441Sodalis glossinidius str. 'morsitans', complete genomehypothetical protein9e-1268.9
NC_007712:2028500:207215420721542072591438Sodalis glossinidius str. 'morsitans', complete genomehypothetical protein5e-1063.2
NC_007712:1516589:153669315366931537130438Sodalis glossinidius str. 'morsitans', complete genomehypothetical protein5e-1063.2
NC_007712:3382000:338707633870763387489414Sodalis glossinidius str. 'morsitans', complete genomehypothetical protein1e-0962.4
NC_007712:1893066:190422519042251904638414Sodalis glossinidius str. 'morsitans', complete genomehypothetical protein1e-0962.4
NC_007794:3218729:323508032350803235526447Novosphingobium aromaticivorans DSM 12444, complete genomehypothetical protein2e-0857.8
NC_010002:3509506:353972835397283540126399Delftia acidovorans SPH-1, complete genomehypothetical protein6e-0649.7