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Query: NC_011147:2496808:2496808 Salmonella enterica subsp. enterica serovar Paratyphi A str

Start: 2496808, End: 2497719, Length: 912

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain is a clinical isolate collected from a child with paratyphoid fever in Karachi, Pakistan, 2004. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.

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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010067:2529750:257325325732532574164912Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein3e-162570
NC_011740:2072173:209365720936572094568912Escherichia fergusonii ATCC 35469, complete genomeScaffolding protein (Protein gp8)1e-133475
NC_020418:3102460:312274331227433123657915Morganella morganii subsp. morganii KT, complete genomehypothetical protein1e-130465
NC_007794:3218729:321872932187293219550822Novosphingobium aromaticivorans DSM 12444, complete genomehypothetical protein5e-0652