Pre_GI: BLASTN Hits

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Query: NC_013353:143358 Escherichia coli O103:H2 str. 12009, complete genome

Start: 143358, End: 166099, Length: 22742

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
AP010958:143358*14335816609922742Escherichia coli O103:H2 str. 12009 DNA, complete genome044820BLASTN svgBLASTP svg
NC_011740:165363*16536318914823786Escherichia fergusonii ATCC 35469, complete genome03770BLASTN svgBLASTP svg
NC_008253:149693*14969317261122919Escherichia coli 536, complete genome012110BLASTN svgBLASTP svg
NC_004431:153907*15390717771123805Escherichia coli CFT073, complete genome012240BLASTN svgBLASTP svg
NC_007946:149733*14973317320823476Escherichia coli UTI89, complete genome012320BLASTN svgBLASTP svg
NC_008563:149709*14970917318423476Escherichia coli APEC O1, complete genome012320BLASTN svgBLASTP svg
NC_010498:153755*15375517756723813Escherichia coli SMS-3-5, complete genome013290BLASTN svgBLASTP svg
NC_010468:3835259*3835259385816422906Escherichia coli ATCC 8739, complete genome013720BLASTN svgBLASTP svg
NC_011750:156799*15679917601919221Escherichia coli IAI39 chromosome, complete genome022450BLASTN svgBLASTP svg
NC_010473:118681*11868113863819958Escherichia coli str. K-12 substr. DH10B, complete genome023680BLASTN svgBLASTP svg
AC_000091:144577*14457716459920023Escherichia coli W3110 DNA, complete genome023810BLASTN svgBLASTP svg
NC_009801:143426*14342616609922674Escherichia coli E24377A, complete genome044340BLASTN svgBLASTP svg
NC_011748:143755*14375516736523611Escherichia coli 55989, complete genome040700BLASTN svgBLASTP svg
CU928145:143755*14375516736523611Escherichia coli 55989 chromosome, complete genome040700BLASTN svgBLASTP svg
CP002185:146389*14638916862022232Escherichia coli W, complete genome038080BLASTN svgBLASTP svg
CU928160:145276*14527616477719502Escherichia coli IAI1 chromosome, complete genome037630BLASTN svgBLASTP svg
CP002516:3949061*3949061396781618756Escherichia coli KO11, complete genome036330BLASTN svgBLASTP svg
NC_000913:144577*14457716459920023Escherichia coli K12, complete genome023810BLASTN svgBLASTP svg
NC_013961:2861949*2861949288466722719Erwinia amylovora, complete genome2e-112414BLASTN svgBLASTP svg
NC_009801:46430004643000466340420405Escherichia coli E24377A, complete genome4e-42180BLASTN svgBLASTP svg
NC_007384:45300004530000455031620317Shigella sonnei Ss046, complete genome6e-38167BLASTN svgBLASTP svg
NC_007613:41568414156841418149124651Shigella boydii Sb227, complete genome2e-35159BLASTN svgBLASTP svg
NC_020063:2785652*2785652280843522784Enterobacteriaceae bacterium strain FGI 57, complete genome3e-18101BLASTN svgBLASTP svg
NC_015733:1680500*1680500170310522606Pseudomonas putida S16 chromosome, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_020063:33525163352516337629223777Enterobacteriaceae bacterium strain FGI 57, complete genome5e-1487.7BLASTN svgBLASTP svg
NC_011748:46959324695932471752121590Escherichia coli 55989, complete genome2e-1385.7BLASTN svgBLASTP svg
CU928145:46959324695932471752121590Escherichia coli 55989 chromosome, complete genome2e-1385.7BLASTN svgBLASTP svg
AC_000091:27332527332530179728473Escherichia coli W3110 DNA, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_000913:27207127207130179729727Escherichia coli K12, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_010473:24742924742927209924671Escherichia coli str. K-12 substr. DH10B, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_015968:11658291165829118639520567Enterobacter asburiae LF7a chromosome, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_020063:24809832480983250703626054Enterobacteriaceae bacterium strain FGI 57, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_010694:96238396238398280120419Erwinia tasmaniensis, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_015968:511282*51128254179030509Enterobacter asburiae LF7a chromosome, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_011149:3863913*3863913388509921187Salmonella enterica subsp. enterica serovar Agona str. SL483,2e-1075.8BLASTN svgBLASTP svg
NC_014121:677799*67779969989822100Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, complete2e-1075.8BLASTN svgBLASTP svg
NC_009800:43322294332229435609923871Escherichia coli HS, complete genome7e-1073.8BLASTN svgBLASTP svg
CU928160:43951564395156441536720212Escherichia coli IAI1 chromosome, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_015968:43898714389871441516025290Enterobacter asburiae LF7a chromosome, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_002488:11576841157684117959921916Xylella fastidiosa 9a5c, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_009092:37323903732390375553223143Shewanella loihica PV-4, complete genome2e-0765.9BLASTN svgBLASTP svg
CU928160:2818750*2818750284490226153Escherichia coli IAI1 chromosome, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_010498:4821519*4821519484497023452Escherichia coli SMS-3-5, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_008700:19948291994829201620821380Shewanella amazonensis SB2B, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_007005:51543175154317518283828522Pseudomonas syringae pv. syringae B728a, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_004337:3590323*35903233952993362671Shigella flexneri 2a str. 301, complete genome3e-0661.9BLASTN svgBLASTP svg