Pre_GI: BLASTP Hits

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Query: NC_013315:1707293:1716396 Clostridium difficile CD196 chromosome, complete genome

Start: 1716396, End: 1717085, Length: 690

Host Lineage: Peptoclostridium difficile; Peptoclostridium; Peptostreptococcaceae; Clostridiales; Firmicutes; Bacteria

General Information: Isolated from a single patient with pseudomembranous colitis in a Paris hospital in 1985. Clostridium difficile, a Gram-positive, spore-forming anaerobic bacterium, is the leading cause of infectious diarrhea among patients in hospitals worldwide, causing C. difficile infection (CDI). An important nosocomial pathogen, it is frequently associated with antibiotic treatment and causes diseases ranging from antibiotic-associated diarrhea to life-threatening pseudomembraneous colitis.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013517:1501276:151307915130791513726648Sebaldella termitidis ATCC 33386, complete genomehypothetical protein1e-33142
NC_015913:117966:146892146892147593702Candidatus Arthromitus sp. SFB-mouse-Japan, complete genomehypothetical protein4e-33141
NC_010001:3614314:362179536217953622733939Clostridium phytofermentans ISDg, complete genomePeptidoglycan-binding LysM6e-33140
NC_017297:2531750:253784125378412538518678Clostridium botulinum F str. 230613 chromosome, complete genomelysM domain protein3e-25115
NC_020134:420500:445303445303446001699Clostridium stercorarium subsp. stercorarium DSM 8532, completepeptidoglycan-binding lysin domain-containing protein1e-22106
NC_009012:2953638:295937729593772960036660Clostridium thermocellum ATCC 27405, complete genomePeptidoglycan-binding LysM1e-20100
NC_020244:1335531:134209013420901342749660Bacillus subtilis XF-1, complete genomehypothetical protein9e-1993.6
NC_014976:3546884:355283535528353553494660Bacillus subtilis BSn5 chromosome, complete genomeputative PBSX prophage murein binding protein2e-1892.8
NC_020291:795500:851136851136851813678Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeLysM domain-containing protein2e-1892.4
NC_000964:1330000:133822213382221338929708Bacillus subtilis subsp. subtilis str. 168, complete genomehypothetical protein2e-1892.4
NC_016047:261304:266639266639267298660Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, completeLysM domain-containing protein4e-1891.7
NC_017195:1308730:131587613158761316487612Bacillus subtilis subsp. subtilis str. RO-NN-1 chromosome, completeLysM domain protein1e-1790.1
NC_015737:143428:158238158238159068831Clostridium sp. SY8519, complete genomehypothetical protein1e-1790.1
NC_014976:627935:656870656870657529660Bacillus subtilis BSn5 chromosome, complete genomehypothetical protein2e-1789.7
NC_000964:2670288:267128126712812671940660Bacillus subtilis subsp. subtilis str. 168, complete genomehypothetical protein2e-1789.7
NC_018515:3411276:342770634277063428368663Desulfosporosinus meridiei DSM 13257 chromosome, complete genomeLysM domain-containing protein2e-1789.4
NC_011830:1504497:152165615216561522327672Desulfitobacterium hafniense DCB-2, complete genomePeptidoglycan-binding LysM4e-1788.2
UCMB5137:861734:875509875509876168660Bacillus atrophaeus UCMB-5137hypothetical protein1e-1687
NC_010723:915697:926873926873927535663Clostridium botulinum E3 str. Alaska E43, complete genomepeptidoglycan-binding LysM1e-1686.7
NC_014479:1291500:129713212971321297791660Bacillus subtilis subsp. spizizenii str. W23 chromosome, completeputative murein binding protein; PBSZ phage4e-1478.2
NC_016047:1435961:144521114452111445870660Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, completeLysM domain-containing protein4e-1478.2
NC_019896:2719456:273037327303732731065693Bacillus subtilis subsp. subtilis str. BSP1 chromosome, completePhage-like element PBSX protein XkdP2e-1375.9
NC_013406:6052913:605565560556556056374720Paenibacillus sp. Y412MC10 chromosome, complete genomepeptidoglycan-binding lysin domain-containing protein5e-1374.7
NC_014376:1472304:150433215043321504994663Clostridium saccharolyticum WM1 chromosome, complete genomePeptidoglycan-binding lysin domain protein1e-1273.6
NC_013216:4404085:441613744161374416790654Desulfotomaculum acetoxidans DSM 771, complete genomePeptidoglycan-binding LysM5e-1167.8
NC_009495:2479465:248513624851362485789654Clostridium botulinum A str. ATCC 3502 chromosome, complete genomehypothetical protein9e-1167.4
NC_009848:2755874:276134227613422762010669Bacillus pumilus SAFR-032, complete genomehypothetical protein1e-1066.6
NC_014652:801653:825871825871826527657Caldicellulosiruptor hydrothermalis 108 chromosome, completepeptidoglycan-binding lysin domain protein2e-0962.4
NC_013406:6052913:606795160679516068595645Paenibacillus sp. Y412MC10 chromosome, complete genomepeptidoglycan-binding lysin domain-containing protein3e-0962
NC_009617:3926843:394233639423363942815480Clostridium beijerinckii NCIMB 8052 chromosome, complete genomehypothetical protein2e-0859.3
NC_012563:2566500:257315425731542573843690Clostridium botulinum A2 str. Kyoto, complete genomehypothetical protein4e-0858.2
NC_010337:2793667:281957328195732820295723Heliobacterium modesticaldum Ice1, complete genomen-acetylmuramoyl-l-alanine amidase precursor, putative1e-0757
NC_020291:795500:837645837645838124480Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomehypothetical protein2e-0755.8
NC_009633:2592000:259999325999932600643651Alkaliphilus metalliredigens QYMF chromosome, complete genomepeptidoglycan-binding protein LysM3e-0755.5
NC_014483:1179286:118924511892451189889645Paenibacillus polymyxa E681 chromosome, complete genomePhage-like element PBSX protein xkdP9e-0753.9
NC_016641:2950000:295805629580562958697642Paenibacillus terrae HPL-003 chromosome, complete genomepeptidoglycan-binding lysin2e-0652.8
NC_014410:800500:832829832829833233405Thermoanaerobacterium thermosaccharolyticum DSM 571 chromosome,Peptidoglycan-binding lysin domain5e-0651.6
NC_004337:2747917:276889627688962769345450Shigella flexneri 2a str. 301, complete genomehypothetical protein7e-0650.8
NC_012759:2633949:268017126801712680620450Escherichia coli BW2952 chromosome, complete genomeLysM domain/BON superfamily protein7e-0650.8
NC_011742:2863316:288353428835342883983450Escherichia coli S88 chromosome, complete genomeLysM domain/BON superfamily protein7e-0650.8
NC_011601:2998326:302220030222003022649450Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomeLysM domain/BON superfamily protein7e-0650.8
NC_010473:2839902:288612428861242886573450Escherichia coli str. K-12 substr. DH10B, complete genomehypothetical protein7e-0650.8
NC_008563:2946391:296622329662232966672450Escherichia coli APEC O1, complete genomehypothetical protein7e-0650.8
NC_000913:2746886:279435927943592794808450Escherichia coli K12, complete genomehypothetical protein7e-0650.8
AC_000091:2747520:279499327949932795442450Escherichia coli W3110 DNA, complete genomehypothetical protein7e-0650.8
CP002185:2919752:294245229424522942901450Escherichia coli W, complete genomepredicted protein7e-0650.8
CU928160:2818750:284124628412462841695450Escherichia coli IAI1 chromosome, complete genomeconserved hypothetical protein7e-0650.8
AP010958:3238742:325886232588623259311450Escherichia coli O103:H2 str. 12009 DNA, complete genomeconserved predicted protein7e-0650.8
NC_017328:2785309:280777828077782808227450Shigella flexneri 2002017 chromosome, complete genomephospholipid-binding protein7e-0650.8
NC_016822:3065426:308816630881663088615450Shigella sonnei 53G, complete genomeLysM domain/BON superfamily protein7e-0650.8
NC_013364:3339768:335995133599513360400450Escherichia coli O111:H- str. 11128, complete genomehypothetical protein7e-0650.8
NC_013361:3651150:367477736747773675226450Escherichia coli O26:H11 str. 11368 chromosome, complete genomeLysM domain/BON superfamily protein7e-0650.8
NC_013353:3238742:325886232588623259311450Escherichia coli O103:H2 str. 12009, complete genomehypothetical protein7e-0650.8
NC_012967:2669182:269109026910902691539450Escherichia coli B str. REL606 chromosome, complete genomeLysM domain/BON superfamily protein7e-0650.8
NC_011741:2818750:284124628412462841695450Escherichia coli IAI1 chromosome, complete genomeLysM domain/BON superfamily protein7e-0650.8
NC_007384:2933625:295600229560022956451450Shigella sonnei Ss046, complete genomehypothetical protein7e-0650.8
NC_004741:2741971:276353227635322763981450Shigella flexneri 2a str. 2457T, complete genomehypothetical protein7e-0650.8
NC_011750:2928990:296387329638732964322450Escherichia coli IAI39 chromosome, complete genomeLysM domain/BON superfamily protein7e-0650.8