Pre_GI Gene

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Host: NC_009617 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_009617:3926843 Clostridium beijerinckii NCIMB 8052 chromosome, complete genome

Host Lineage: Clostridium beijerinckii; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: Solvent-producing bacterium. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Some species are capable of producing organic solvents (acetone, ethanol, etc,), molecular hydrogen and other useful compounds. There are also species that can fix molecular nitrogen and thus are important participants in biological turnaround of nitrogen compounds in nature. This species is used to produce industrial solvents.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
392684339299533111PASPAC sensor signal transduction histidine kinaseQuickGO ontologyBLASTP
39300723930422351hypothetical protein
39304433930937495YbaKprolyl-tRNA synthetase associated domain-containing proteinQuickGO ontologyBLASTP
39312653931927663cell wall binding repeat-containing proteinQuickGO ontologyBLASTP
39323353932721387hypothetical proteinBLASTP
39327373932970234hypothetical proteinBLASTP
393322339346501428hypothetical proteinBLASTP
39348683935041174hypothetical protein
39350433935327285hypothetical proteinBLASTP
393535139371621812periplasmic ligand-binding sensor proteinQuickGO ontologyBLASTP
39371753937957783hypothetical protein
39381283938781654tail fiber-like proteinQuickGO ontologyBLASTP
39387833939487705hypothetical proteinBLASTP
393948039405891110baseplate J family proteinQuickGO ontologyBLASTP
39405793941019441hypothetical proteinBLASTP
39410123941335324hypothetical proteinBLASTP
394133539423391005phage-like element pbsx protein XkdQQuickGO ontologyBLASTP
39423363942815480hypothetical proteinBLASTP
394282939452492421hypothetical proteinBLASTP
39454253945829405Phage XkdN-like proteinQuickGO ontologyBLASTP
39462333946664432phage-like element pbsx protein XkdMQuickGO ontologyBLASTP
394667739477981122phage-like element pbsx protein XkdKQuickGO ontologyBLASTP
39478113948245435hypothetical proteinBLASTP
39487373949402666hypothetical protein
39494773949983507hypothetical protein
39501843950738555RNA 2-phosphotransferase-like proteinQuickGO ontologyBLASTP
395131239535582247integral membrane sensor hybrid histidine kinaseQuickGO ontologyBLASTP
39535593954062504response regulator receiver proteinQuickGO ontology
395405539552661212response regulator receiver sensor signal transduction histidine kinaseQuickGO ontologyBLASTP