Pre_GI Gene

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Host: NC_011601 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_011601:2998326 Escherichia coli O127:H6 str. E2348/69 chromosome, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Enteropathogenic Escherichia coli (EPEC) is an important cause of fatal infant diarrhea. EPEC induces diarrhea by attaching and effacing to host cells in the small intestine, inducing cytoskeletal rearrangements that result in pedastel formation, and then by introducing toxins into the host cell. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
29983262998808483SsrA-binding proteinQuickGO ontologyBLASTP
30038903004108219hypothetical proteinBLASTP
30043693004740372hypothetical proteinBLASTP
300549430094113918serine proteaseQuickGO ontologyBLASTP
300998130111531173T3SS secreted effector EspG-like proteinQuickGO ontologyBLASTP
30112323011396165hypothetical protein
30119773012462486hypothetical protein
30136153013785171hypothetical protein
30137923013992201hypothetical protein
30141613014541381hypothetical proteinBLASTP
30148493015826978hypothetical proteinBLASTP
301584630171141269hydroxyglutarate oxidaseQuickGO ontologyBLASTP
301713730185851449succinate-semialdehyde dehydrogenase IQuickGO ontologyBLASTP
3018599301987912814-aminobutyrate aminotransferaseQuickGO ontologyBLASTP
302011630215161401gamma-aminobutyrate transporterQuickGO ontologyBLASTP
30215373022199663DNA-binding transcriptional regulator CsiRQuickGO ontologyBLASTP
30222003022649450LysM domainBON superfamily proteinQuickGO ontologyBLASTP
30227333022891159membrane proteinQuickGO ontologyBLASTP
30230743023373300DNA-binding transcriptional regulatorQuickGO ontologyBLASTP
30233833023907525inner membrane protein with hydrolase activityQuickGO ontologyBLASTP
30239543024358405DNA binding proteinQuickGO ontologyBLASTP
30250253025474450hypothetical proteinBLASTP
30255113025855345hypothetical proteinBLASTP
30260073026336330hypothetical proteinBLASTP