Pre_GI: BLASTN Hits

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Query: NC_012808:1122341 Methylobacterium extorquens AM1, complete genome

Start: 1122341, End: 1159209, Length: 36869

Host Lineage: Methylobacterium extorquens; Methylobacterium; Methylobacteriaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: First isolated in 1960 in Oxford, England, as an airborne contaminant growing on methylamine. This strain can grow on methylamine or methanol, but not methane. This organism is capable of growth on one-carbon compounds such as methanol. Methanol is oxidized to formaldehyde which is then used metabolically to generate either energy or biomass. These bacteria are commonly found in the environment, especially associated with plants which produce methanol when metabolizing pectin during cell wall synthesis. At least 25 genes are required for this complex process of converting methanol to formaldehyde and this specialized metabolic pathway is of great interest.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_011757:15535001553500157885725358Methylobacterium chloromethanicum CM4, complete genome04657BLASTN svgBLASTP svg
NC_012811:11388971138897115709918203Methylobacterium extorquens AM1 megaplasmid, complete sequence03217BLASTN svgBLASTP svg
NC_012808:58701*587018490626206Methylobacterium extorquens AM1, complete genome03217BLASTN svgBLASTP svg
NC_012808:4137000*4137000416801731018Methylobacterium extorquens AM1, complete genome03207BLASTN svgBLASTP svg
NC_011757:1532047*1532047155075218706Methylobacterium chloromethanicum CM4, complete genome03001BLASTN svgBLASTP svg
NC_011757:11212621121262114088219621Methylobacterium chloromethanicum CM4, complete genome02777BLASTN svgBLASTP svg
NC_012808:92198592198594462922645Methylobacterium extorquens AM1, complete genome02775BLASTN svgBLASTP svg
NC_012808:37118063711806373409922294Methylobacterium extorquens AM1, complete genome02775BLASTN svgBLASTP svg
NC_011757:39881*398817409934219Methylobacterium chloromethanicum CM4, complete genome02775BLASTN svgBLASTP svg
NC_012808:4235567*4235567425812622560Methylobacterium extorquens AM1, complete genome02773BLASTN svgBLASTP svg
NC_012811:11053951105395112959924205Methylobacterium extorquens AM1 megaplasmid, complete sequence02773BLASTN svgBLASTP svg
NC_012811:22754122754127111643576Methylobacterium extorquens AM1 megaplasmid, complete sequence02773BLASTN svgBLASTP svg
NC_012808:38977513897751392263924889Methylobacterium extorquens AM1, complete genome02383BLASTN svgBLASTP svg
NC_012808:48777034877703489559917897Methylobacterium extorquens AM1, complete genome02381BLASTN svgBLASTP svg
NC_012808:420334*42033444610925776Methylobacterium extorquens AM1, complete genome02381BLASTN svgBLASTP svg
NC_012808:39729833972983399542222440Methylobacterium extorquens AM1, complete genome02381BLASTN svgBLASTP svg
NC_012808:1220378*1220378126948449107Methylobacterium extorquens AM1, complete genome02381BLASTN svgBLASTP svg
NC_012811:41077641077643723726462Methylobacterium extorquens AM1 megaplasmid, complete sequence02379BLASTN svgBLASTP svg
NC_012808:806432*80643283135724926Methylobacterium extorquens AM1, complete genome02375BLASTN svgBLASTP svg
NC_010725:39929483992948402434231395Methylobacterium populi BJ001, complete genome01402BLASTN svgBLASTP svg
NC_010725:45119394511939454748235544Methylobacterium populi BJ001, complete genome01400BLASTN svgBLASTP svg
NC_010725:4219500*4219500425012730628Methylobacterium populi BJ001, complete genome01400BLASTN svgBLASTP svg
NC_010725:3917369*3917369396168844320Methylobacterium populi BJ001, complete genome01400BLASTN svgBLASTP svg
NC_011758:24766624766626663818973Methylobacterium chloromethanicum CM4 plasmid pMCHL01, complete01289BLASTN svgBLASTP svg
NC_011757:51700051700055359936600Methylobacterium chloromethanicum CM4, complete genome01021BLASTN svgBLASTP svg
NC_010505:1205747*1205747122904923303Methylobacterium radiotolerans JCM 2831, complete genome0805BLASTN svgBLASTP svg
NC_011757:5742290*5742290578349941210Methylobacterium chloromethanicum CM4, complete genome0771BLASTN svgBLASTP svg
NC_010172:5447189*5447189548599938811Methylobacterium extorquens PA1, complete genome3e-146527BLASTN svgBLASTP svg
NC_012808:157156*15715618609928944Methylobacterium extorquens AM1, complete genome6e-138500BLASTN svgBLASTP svg
NC_011887:11061811061813688826271Methylobacterium nodulans ORS 2060 plasmid pMNOD02, complete2e-103385BLASTN svgBLASTP svg
NC_011757:44453434445343447709931757Methylobacterium chloromethanicum CM4, complete genome1e-101379BLASTN svgBLASTP svg
NC_002678:50606705060670511283352164Mesorhizobium loti MAFF303099, complete genome2e-70276BLASTN svgBLASTP svg
NC_010725:5491491*5491491552462633136Methylobacterium populi BJ001, complete genome5e-52214BLASTN svgBLASTP svg
NC_015186:1126830*1126830116450437675Acidiphilium multivorum AIU301, complete genome2e-48202BLASTN svgBLASTP svg
NC_015186:347346*34734637448527140Acidiphilium multivorum AIU301, complete genome7e-48200BLASTN svgBLASTP svg
NC_010172:4064087*4064087410309939013Methylobacterium extorquens PA1, complete genome7e-48200BLASTN svgBLASTP svg
NC_008435:23680002368000241142943430Rhodopseudomonas palustris BisA53, complete genome3e-47198BLASTN svgBLASTP svg
NC_010725:39619813961981398401922039Methylobacterium populi BJ001, complete genome3e-44188BLASTN svgBLASTP svg
NC_004463:18986481898648196425565608Bradyrhizobium japonicum USDA 110, complete genome1e-43186BLASTN svgBLASTP svg
NC_004463:18725371872537189486322327Bradyrhizobium japonicum USDA 110, complete genome1e-43186BLASTN svgBLASTP svg
NC_011757:10914861091486111319221707Methylobacterium chloromethanicum CM4, complete genome7e-42180BLASTN svgBLASTP svg
NC_011757:21773921773923612518387Methylobacterium chloromethanicum CM4, complete genome3e-41178BLASTN svgBLASTP svg
NC_010338:4530403*4530403455419223790Caulobacter sp. K31, complete genome1e-34157BLASTN svgBLASTP svg
NC_007958:830000*83000086140231403Rhodopseudomonas palustris BisB5, complete genome1e-34157BLASTN svgBLASTP svg
NC_015684:362236*36223640024938014Oligotropha carboxidovorans OM5 chromosome, complete genome2e-33153BLASTN svgBLASTP svg
NC_011386:136223*13622316996433742Oligotropha carboxidovorans OM5, complete genome2e-33153BLASTN svgBLASTP svg
NC_013856:69200069200071990027901Azospirillum sp. B510 plasmid pAB510b, complete sequence6e-33151BLASTN svgBLASTP svg
NC_009937:3748885*3748885376963220748Azorhizobium caulinodans ORS 571, complete genome9e-29137BLASTN svgBLASTP svg
NC_011894:6888562*6888562695715868597Methylobacterium nodulans ORS 2060, complete genome8e-23117BLASTN svgBLASTP svg
NC_007348:2558500*2558500258100922510Ralstonia eutropha JMP134 chromosome 2, complete sequence8e-23117BLASTN svgBLASTP svg
NC_003317:1030220*1030220105366423445Brucella melitensis 16M chromosome I, complete sequence1e-21113BLASTN svgBLASTP svg
NC_008228:372520*37252039209919580Pseudoalteromonas atlantica T6c, complete genome1e-21113BLASTN svgBLASTP svg
NC_009720:583060*58306060772824669Xanthobacter autotrophicus Py2, complete genome1e-21113BLASTN svgBLASTP svg
NC_011144:10739441073944109429420351Phenylobacterium zucineum HLK1, complete genome1e-21113BLASTN svgBLASTP svg
NC_011144:26742422674242270317628935Phenylobacterium zucineum HLK1, complete genome1e-21113BLASTN svgBLASTP svg
NC_011144:2710876*2710876272938418509Phenylobacterium zucineum HLK1, complete genome1e-21113BLASTN svgBLASTP svg
NC_014414:1104386*1104386112320218817Parvularcula bermudensis HTCC2503 chromosome, complete genome1e-21113BLASTN svgBLASTP svg
NC_014817:142976*14297616583322858Asticcacaulis excentricus CB 48 chromosome 2, complete sequence1e-21113BLASTN svgBLASTP svg
NC_015580:3834244*3834244385840724164Novosphingobium sp. PP1Y, complete genome1e-21113BLASTN svgBLASTP svg
NC_010125:10517351051735108259930865Gluconacetobacter diazotrophicus PAl 5, complete genome5e-21111BLASTN svgBLASTP svg
NC_010125:14850014850017622727728Gluconacetobacter diazotrophicus PAl 5, complete genome5e-21111BLASTN svgBLASTP svg
NC_010125:15383351538335158603047696Gluconacetobacter diazotrophicus PAl 5, complete genome5e-21111BLASTN svgBLASTP svg
NC_010125:28136532813653283723423582Gluconacetobacter diazotrophicus PAl 5, complete genome5e-21111BLASTN svgBLASTP svg
NC_010125:38171138171140405422344Gluconacetobacter diazotrophicus PAl 5, complete genome5e-21111BLASTN svgBLASTP svg
NC_010125:955863*955863100278546923Gluconacetobacter diazotrophicus PAl 5, complete genome5e-21111BLASTN svgBLASTP svg
NC_013209:2248119*2248119229545347335Acetobacter pasteurianus IFO 3283-01, complete genome3e-19105BLASTN svgBLASTP svg
NC_014010:1392536*1392536145077158236Candidatus Puniceispirillum marinum IMCC1322 chromosome, complete3e-19105BLASTN svgBLASTP svg
NC_008740:443274*44327451891675643Marinobacter aquaeolei VT8, complete genome2e-1799.6BLASTN svgBLASTP svg
NC_009720:12488661248866127253723672Xanthobacter autotrophicus Py2, complete genome8e-1797.6BLASTN svgBLASTP svg
NC_012850:45931545931548320123887Rhizobium leguminosarum bv. trifolii WSM1325, complete genome3e-1695.6BLASTN svgBLASTP svg
NC_012587:2744731*2744731277030625576Rhizobium sp. NGR234, complete genome3e-1695.6BLASTN svgBLASTP svg
NC_011757:51027325102732513806935338Methylobacterium chloromethanicum CM4, complete genome1e-1593.7BLASTN svgBLASTP svg
NC_009952:2661268*2661268268533524068Dinoroseobacter shibae DFL 12, complete genome2e-1489.7BLASTN svgBLASTP svg
NC_009952:3522370*3522370356180439435Dinoroseobacter shibae DFL 12, complete genome2e-1489.7BLASTN svgBLASTP svg
NC_009952:366959*36695940184134883Dinoroseobacter shibae DFL 12, complete genome2e-1489.7BLASTN svgBLASTP svg
NC_010505:21038872103887213081426928Methylobacterium radiotolerans JCM 2831, complete genome2e-1489.7BLASTN svgBLASTP svg
NC_011757:748223*74822379542247200Methylobacterium chloromethanicum CM4, complete genome2e-1489.7BLASTN svgBLASTP svg
NC_012808:594000*59400061960225603Methylobacterium extorquens AM1, complete genome2e-1489.7BLASTN svgBLASTP svg
NC_010505:5496170*5496170552318327014Methylobacterium radiotolerans JCM 2831, complete genome8e-1487.7BLASTN svgBLASTP svg
NC_007712:4067500*4067500409105923560Sodalis glossinidius str. 'morsitans', complete genome3e-1385.7BLASTN svgBLASTP svg
NC_011894:3988500*3988500401357725078Methylobacterium nodulans ORS 2060, complete genome3e-1385.7BLASTN svgBLASTP svg
NC_011894:62596496259649628391924271Methylobacterium nodulans ORS 2060, complete genome3e-1385.7BLASTN svgBLASTP svg
NC_011894:65168566516856654688430029Methylobacterium nodulans ORS 2060, complete genome3e-1385.7BLASTN svgBLASTP svg
NC_011894:67227067227069179519526Methylobacterium nodulans ORS 2060, complete genome3e-1385.7BLASTN svgBLASTP svg
NC_011894:7563668*7563668760232338656Methylobacterium nodulans ORS 2060, complete genome3e-1385.7BLASTN svgBLASTP svg
NC_015186:2197236*2197236229649299257Acidiphilium multivorum AIU301, complete genome3e-1385.7BLASTN svgBLASTP svg
NC_004463:1992000*1992000204369751698Bradyrhizobium japonicum USDA 110, complete genome1e-1283.8BLASTN svgBLASTP svg
NC_008687:22994122994125509925159Paracoccus denitrificans PD1222 chromosome 2, complete sequence1e-1283.8BLASTN svgBLASTP svg
NC_010510:139685*13968516159921915Methylobacterium radiotolerans JCM 2831 plasmid pMRAD01, complete1e-1283.8BLASTN svgBLASTP svg
NC_010515:19009671900967192454423578Burkholderia cenocepacia MC0-3 chromosome 2, complete sequence1e-1283.8BLASTN svgBLASTP svg
NC_009952:1680682*1680682171856437883Dinoroseobacter shibae DFL 12, complete genome5e-1281.8BLASTN svgBLASTP svg
NC_009720:44069914406991444791640926Xanthobacter autotrophicus Py2, complete genome5e-1281.8BLASTN svgBLASTP svg
NC_007778:1053462*1053462107959926138Rhodopseudomonas palustris HaA2, complete genome5e-1281.8BLASTN svgBLASTP svg
NC_002696:2941644*2941644296461322970Caulobacter crescentus CB15, complete genome2e-1179.8BLASTN svgBLASTP svg
NC_014006:13652071365207139275727551Sphingobium japonicum UT26S chromosome 1, complete genome7e-1177.8BLASTN svgBLASTP svg
NC_012660:5571500*5571500559959928100Pseudomonas fluorescens SBW25 chromosome, complete genome3e-1075.8BLASTN svgBLASTP svg
NC_011958:1031592*1031592107050538914Rhodobacter sphaeroides KD131 chromosome 2, complete genome3e-1075.8BLASTN svgBLASTP svg
NC_007963:11908471190847124782656980Chromohalobacter salexigens DSM 3043, complete genome3e-1075.8BLASTN svgBLASTP svg
NC_007626:35222653522265361842896164Magnetospirillum magneticum AMB-1, complete genome3e-1075.8BLASTN svgBLASTP svg
NC_007626:3393940*3393940344229748358Magnetospirillum magneticum AMB-1, complete genome3e-1075.8BLASTN svgBLASTP svg
NC_007005:40623114062311408347221162Pseudomonas syringae pv. syringae B728a, complete genome1e-0973.8BLASTN svgBLASTP svg
NC_007626:10910001091000111043819439Magnetospirillum magneticum AMB-1, complete genome1e-0973.8BLASTN svgBLASTP svg
NC_008209:25366325366327713323471Roseobacter denitrificans OCh 114, complete genome1e-0973.8BLASTN svgBLASTP svg
NC_011004:4947980*4947980497058322604Rhodopseudomonas palustris TIE-1, complete genome1e-0973.8BLASTN svgBLASTP svg
NC_015410:96952696952699007820553Pseudomonas mendocina NK-01 chromosome, complete genome5e-0971.9BLASTN svgBLASTP svg
NC_013851:31669693166969319361626648Allochromatium vinosum DSM 180 chromosome, complete genome5e-0971.9BLASTN svgBLASTP svg
NC_011666:2109274*2109274213911129838Methylocella silvestris BL2, complete genome5e-0971.9BLASTN svgBLASTP svg
NC_010172:798923*79892388030381381Methylobacterium extorquens PA1, complete genome5e-0971.9BLASTN svgBLASTP svg
NC_009050:567209*56720959401626808Rhodobacter sphaeroides ATCC 17029 chromosome 2, complete sequence2e-0869.9BLASTN svgBLASTP svg
NC_011894:31612893161289320428142993Methylobacterium nodulans ORS 2060, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_014623:6950638*6950638697978129144Stigmatella aurantiaca DW4/3-1 chromosome, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_015957:3067919*3067919309418126263Streptomyces violaceusniger Tu 4113 chromosome, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_015957:72498737249873727238122509Streptomyces violaceusniger Tu 4113 chromosome, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_020126:6738959*6738959675803819080Myxococcus stipitatus DSM 14675, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_004463:21581162158116223609977984Bradyrhizobium japonicum USDA 110, complete genome7e-0867.9BLASTN svgBLASTP svg
NC_006350:1084930*1084930112191036981Burkholderia pseudomallei K96243 chromosome 1, complete sequence7e-0867.9BLASTN svgBLASTP svg
NC_008314:47772247772252609948378Ralstonia eutropha H16 chromosome 2, complete sequence7e-0867.9BLASTN svgBLASTP svg
NC_008435:39151103915110393809922990Rhodopseudomonas palustris BisA53, complete genome7e-0867.9BLASTN svgBLASTP svg
NC_010505:40095040095042537624427Methylobacterium radiotolerans JCM 2831, complete genome7e-0867.9BLASTN svgBLASTP svg
NC_013169:612456*61245664773335278Kytococcus sedentarius DSM 20547, complete genome7e-0867.9BLASTN svgBLASTP svg
NC_014158:23373323373332771193979Tsukamurella paurometabola DSM 20162 chromosome, complete genome7e-0867.9BLASTN svgBLASTP svg
NC_014159:37920379205903321114Tsukamurella paurometabola DSM 20162 plasmid pTpau01, complete7e-0867.9BLASTN svgBLASTP svg
NC_005296:5238882*5238882526489126010Rhodopseudomonas palustris CGA009, complete genome3e-0765.9BLASTN svgBLASTP svg
NC_008209:1097607*1097607111626218656Roseobacter denitrificans OCh 114, complete genome3e-0765.9BLASTN svgBLASTP svg
NC_008209:33130873313087333311220026Roseobacter denitrificans OCh 114, complete genome3e-0765.9BLASTN svgBLASTP svg
NC_009439:79449879449881473720240Pseudomonas mendocina ymp, complete genome3e-0765.9BLASTN svgBLASTP svg
NC_009720:41242554124255415127427020Xanthobacter autotrophicus Py2, complete genome3e-0765.9BLASTN svgBLASTP svg
NC_011004:5520771*5520771554678126011Rhodopseudomonas palustris TIE-1, complete genome3e-0765.9BLASTN svgBLASTP svg
NC_012660:3689223*3689223371658727365Pseudomonas fluorescens SBW25 chromosome, complete genome3e-0765.9BLASTN svgBLASTP svg
NC_015976:10648881064888109285227965Sphingobium sp. SYK-6, complete genome3e-0765.9BLASTN svgBLASTP svg
NC_007626:40380544038054406859930546Magnetospirillum magneticum AMB-1, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_007722:16893716893719928730351Erythrobacter litoralis HTCC2594, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_007722:21720002172000219518323184Erythrobacter litoralis HTCC2594, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_010688:28501642850164287100220839Xanthomonas campestris pv. campestris, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_014972:2798670*2798670282159922930Desulfobulbus propionicus DSM 2032 chromosome, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_015593:2553500*2553500259301139512Sphingobium chlorophenolicum L-1 chromosome chromosome 1, complete1e-0663.9BLASTN svgBLASTP svg
NC_015947:19373411937341196618728847Burkholderia sp. JV3 chromosome, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_008570:1852286*1852286187535523070Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_009720:216589*21658924097524387Xanthobacter autotrophicus Py2, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_009952:1984955*1984955201717932225Dinoroseobacter shibae DFL 12, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_009952:2217877*2217877224661928743Dinoroseobacter shibae DFL 12, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_009952:44202944202947428932261Dinoroseobacter shibae DFL 12, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_013854:513196*51319653916325968Azospirillum sp. B510, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_014006:12045001204500122366719168Sphingobium japonicum UT26S chromosome 1, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_020911:30469163046916306823221317Octadecabacter antarcticus 307, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_008048:38964538964542759937955Sphingopyxis alaskensis RB2256, complete genome4e-0661.9BLASTN svgBLASTP svg