Pre_GI Gene

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Host: NC_007348 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_007348:2558500 Ralstonia eutropha JMP134 chromosome 2, complete sequence

Host Lineage: Cupriavidus pinatubonensis; Cupriavidus; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: This organism is found in both soil and water and has great potential for use in bioremediation as it is capable of degrading a large list of pollutants including chlorinated aromatic compounds. The bacterium can utilize hydrogen, carbon dioxide, as well as organic compounds for growth and is a model organism for hydrogen oxidation as it can grow on hydrogen as the sole energy source. It was originally isolated due to its ability to degrade the herbicide 2,4-dichlorophenoxyacetic acid, which is due to the degradative functions being encoded on a plasmid (pJP4). Metabolically versatile bacterium. Cupriavidus necator also known as Ralstonia eutropha is a soil bacterium with diverse metabolic abilities. Strains of this organism are resistant to high levels of copper or are able to degrade chloroaromatic compounds such as halobenzoates and nitrophenols making them useful for bioremediation.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
2558765255904327930S ribosomal protein S18QuickGO ontologyBLASTP
255936825608701503Protein of unknown function DUF112 transmembraneQuickGO ontologyBLASTP
25609962561469474hypothetical protein
25614112561785375hypothetical protein
25618422562126285hypothetical proteinBLASTP
25629732563329357hypothetical protein
25636502564099450hypothetical protein
25642222564614393hypothetical proteinBLASTP
25649872565358372hypothetical proteinBLASTP
25655862565750165hypothetical proteinBLASTP
25657972566120324hypothetical proteinBLASTP
25665512566820270hypothetical proteinBLASTP
25670592567280222translation initiation factor IF-1QuickGO ontologyBLASTP
25679252568374450hypothetical protein
25683712568688318hypothetical proteinBLASTP
25686952569552858Transglutaminase-likeQuickGO ontologyBLASTP
25698342570187354hypothetical protein
25701662570489324hypothetical protein
25705092571027519hypothetical proteinBLASTP
25711272571462336hypothetical proteinBLASTP
25714782571747270hypothetical proteinBLASTP
25718032572045243hypothetical protein
25731312573448318hypothetical proteinBLASTP
25735182573769252hypothetical proteinBLASTP
25741652575082918regulatory protein LysRLysR substrate-bindingQuickGO ontologyBLASTP
25751702575463294hypothetical protein
257547425768561383Nasolute symporterQuickGO ontologyBLASTP
257687225785151644AmidohydrolaseAmidohydrolase-likeQuickGO ontologyBLASTP
25785122579468957Cobalamin synthesis proteinP47KCobalamin synthesis CobW C-terminalQuickGO ontologyBLASTP
257956125810091449Short chain fatty acid transporterQuickGO ontologyBLASTP