Pre_GI Gene

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Host: NC_012808 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_012808:58701 Methylobacterium extorquens AM1, complete genome

Host Lineage: Methylobacterium extorquens; Methylobacterium; Methylobacteriaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: First isolated in 1960 in Oxford, England, as an airborne contaminant growing on methylamine. This strain can grow on methylamine or methanol, but not methane. This organism is capable of growth on one-carbon compounds such as methanol. Methanol is oxidized to formaldehyde which is then used metabolically to generate either energy or biomass. These bacteria are commonly found in the environment, especially associated with plants which produce methanol when metabolizing pectin during cell wall synthesis. At least 25 genes are required for this complex process of converting methanol to formaldehyde and this specialized metabolic pathway is of great interest.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
5870160413171330S ribosomal subunit protein S1QuickGO ontologyBLASTP
6082861634807rRNA methylaseQuickGO ontologyBLASTP
617826185675tRNA-GluQuickGO ontologyBLASTP
61962637671806hypothetical proteinBLASTP
6374863876129hypothetical protein
6393164266336hypothetical proteinBLASTP
6717367355183hypothetical protein
67595691511557hypothetical proteinBLASTP
69148714902343hypothetical proteinBLASTP
7148772470984hypothetical proteinBLASTP
7250672946441very-short-patch-repair endonucleaseQuickGO ontologyBLASTP
7331674074759hypothetical proteinBLASTP
7418374509327hypothetical proteinBLASTP
7454474837294Transcriptional regulator XRE familyQuickGO ontologyBLASTP
7507175898828membrane hypothetical proteinQuickGO ontologyBLASTP
75958775501593hypothetical protein
77563792241662hypothetical proteinBLASTP
7960380559957hypothetical protein
8118281649468hypothetical proteinBLASTP
8209983037939Pirin-like proteinQuickGO ontologyBLASTP
83140849061767potassiumproton antiporter CPA2 familyQuickGO ontologyBLASTP