Pre_GI Gene

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Host: NC_012808 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_012808:806432 Methylobacterium extorquens AM1, complete genome

Host Lineage: Methylobacterium extorquens; Methylobacterium; Methylobacteriaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: First isolated in 1960 in Oxford, England, as an airborne contaminant growing on methylamine. This strain can grow on methylamine or methanol, but not methane. This organism is capable of growth on one-carbon compounds such as methanol. Methanol is oxidized to formaldehyde which is then used metabolically to generate either energy or biomass. These bacteria are commonly found in the environment, especially associated with plants which produce methanol when metabolizing pectin during cell wall synthesis. At least 25 genes are required for this complex process of converting methanol to formaldehyde and this specialized metabolic pathway is of great interest.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
8064328084382007putative diguanylate cyclasephosphodiesterase GGDEF and EAL domainsQuickGO ontologyBLASTP
808621808833213hypothetical protein
808878809138261hypothetical proteinBLASTP
809175809624450putative AcetyltransferaseQuickGO ontologyBLASTP
809836810828993ribosomal large subunit pseudouridine synthase D Pseudouridylate synthase Uracil hydrolyaseQuickGO ontologyBLASTP
811357812349993putative GTPaseQuickGO ontologyBLASTP
81409481418895ribosomal RNA 5SQuickGO ontologyBLASTP
81748481755976tRNA-AlaQuickGO ontologyBLASTP
8201188222112094Peptidase M23BQuickGO ontologyBLASTP
822234822728495hypothetical proteinBLASTP
822813823706894putative glutamyl-tRNA synthetaseQuickGO ontologyBLASTP
823736824035300hypothetical proteinBLASTP
824259824477219hypothetical proteinBLASTP
8245008263801881chaperone Hsp90 heat shock protein C 625QuickGO ontologyBLASTP
826535826726192hypothetical proteinBLASTP
8271658287601596putative gamma-glutamyltranspeptidaseQuickGO ontologyBLASTP
8288638305001638Dihydroxyacetone kinase Glycerone kinaseQuickGO ontologyBLASTP
830509831357849putative methyltransferaseQuickGO ontologyBLASTP