Pre_GI Gene

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Host: NC_012808 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_012808:157156 Methylobacterium extorquens AM1, complete genome

Host Lineage: Methylobacterium extorquens; Methylobacterium; Methylobacteriaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: First isolated in 1960 in Oxford, England, as an airborne contaminant growing on methylamine. This strain can grow on methylamine or methanol, but not methane. This organism is capable of growth on one-carbon compounds such as methanol. Methanol is oxidized to formaldehyde which is then used metabolically to generate either energy or biomass. These bacteria are commonly found in the environment, especially associated with plants which produce methanol when metabolizing pectin during cell wall synthesis. At least 25 genes are required for this complex process of converting methanol to formaldehyde and this specialized metabolic pathway is of great interest.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
157156157533378hypothetical protein
15755715762569Integrase family protein fragmentQuickGO ontology
157634157849216hypothetical protein
157868158002135hypothetical protein
157884158315432hypothetical protein
158985159980996putative transcriptional regulator AraC familyQuickGO ontologyBLASTP
160029160586558Type IV pilus assembly PilZQuickGO ontologyBLASTP
160586161467882putative hydrolase alphabeta hydrolase fold family proteinQuickGO ontologyBLASTP
161470162336867putative transcriptional regulator AraC familyQuickGO ontologyBLASTP
1637561654741719Phage integrase family proteinQuickGO ontologyBLASTP
168036168599564putative resolvaseQuickGO ontologyBLASTP
1705041727082205hypothetical proteinBLASTP
17463217472190tRNA-SerQuickGO ontologyBLASTP
1748231761661344recombination proteinQuickGO ontologyBLASTP
1761631776951533putative Zn dependent carboxypeptidaseQuickGO ontologyBLASTP
1778581791051248molecular chaperone HSP70 classQuickGO ontologyBLASTP
1793321807231392Pseudouridine synthase RluDQuickGO ontologyBLASTP
181368182069702putative haloacid dehalogenase family hydrolaseQuickGO ontologyBLASTP
182130182933804hypothetical proteinBLASTP
1835281850601533propionyl-CoA carboxylase beta chainQuickGO ontologyBLASTP
185121185675555hypothetical protein
18581418588875tRNA-ValQuickGO ontology