Pre_GI: BLASTP Hits

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Query: NC_010501:4989455:5007720 Pseudomonas putida W619, complete genome

Start: 5007720, End: 5008130, Length: 411

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Pseudomonas putida is a common endophytic and rhizosphere bacterium. Pseudomonas putida W619 was isolated from the Black Cottonwood tree and is closely related to other endophytic and rhizosphere strains of Pseudomonas putida. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017986:3407913:341311834131183413528411Pseudomonas putida ND6 chromosome, complete genomefimbrial protein pilin7e-67251
NC_009512:755658:760182760182760592411Pseudomonas putida F1, complete genomeFimbrial protein pilin7e-67251
NC_002947:737924:740841740841741251411Pseudomonas putida KT2440, complete genometype IV pili prepilin PilA6e-66248
NC_015733:715947:718863718863719273411Pseudomonas putida S16 chromosome, complete genomefimbrial protein pilin2e-65246
NC_010322:768849:773584773584773994411Pseudomonas putida GB-1 chromosome, complete genomefimbrial protein pilin3e-62236
NC_008027:4953432:496809449680944968504411Pseudomonas entomophila L48, complete genometype IV pili prepilin PilA5e-55212
NC_015947:3539472:354474735447473545154408Burkholderia sp. JV3 chromosome, complete genomefimbrial protein pilin1e-1892
NC_015947:3539472:354525835452583545671414Burkholderia sp. JV3 chromosome, complete genomefimbrial protein pilin1e-1891.7
NC_011071:3544450:355836335583633558767405Stenotrophomonas maltophilia R551-3, complete genomeFimbrial protein pilin4e-1683.2
NC_003919:3812778:381904538190453819485441Xanthomonas axonopodis pv. citri str. 306, complete genomefimbrillin8e-1682.4
NC_003919:3812778:381961038196103820050441Xanthomonas axonopodis pv. citri str. 306, complete genomefimbrillin4e-1476.6
NC_011071:3544450:355886335588633559276414Stenotrophomonas maltophilia R551-3, complete genomeFimbrial protein pilin3e-1270.5
NC_008740:2989856:300134130013413001850510Marinobacter aquaeolei VT8, complete genomeFimbrial protein pilin6e-1166.2
NC_007973:499606:501865501865502413549Ralstonia metallidurans CH34 chromosome 1, complete sequenceFimbrial protein pilin2e-1064.3
NC_011992:3615517:362501936250193625609591Acidovorax ebreus TPSY, complete genomefgenesh4_pg.C_scaffold_28830000022e-0961.2
NC_015563:6357653:636608763660876366611525Delftia sp. Cs1-4 chromosome, complete genometype IV pilin structural subunit4e-0960.1
NC_013521:1976331:198460819846081985015408Sanguibacter keddieii DSM 10542, complete genomeprepilin-type N-terminal cleavage/methylation domain-containing protein6e-0959.7
NC_014532:2298628:231409123140912314549459Halomonas elongata DSM 2581, complete genomehypothetical protein6e-0959.7
NC_015556:4118304:413193541319354132417483Pseudomonas fulva 12-X chromosome, complete genometype IV pilin5e-0959.7
NC_009256:2945059:2974978297497829762041227Burkholderia vietnamiensis G4 chromosome 1, complete sequencefimbrial protein pilin7e-0959.3
NC_009434:1156834:116375511637551164267513Pseudomonas stutzeri A1501, complete genomefimbrial protein ecpC precursor9e-0958.9
NC_012791:2590500:260234226023422602830489Variovorax paradoxus S110 chromosome 1, complete genomeFimbrial protein pilin2e-0858.2
NC_018868:3943088:395314139531413953581441Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genomefimbrial protein pilin2e-0857.8
NC_007908:1328832:135976413597641360246483Rhodoferax ferrireducens T118, complete genomemethylation4e-0856.6
NC_002977:1600350:160993516099351610351417Methylococcus capsulatus str. Bath, complete genomefimbrial protein6e-0856.2
NC_007645:5397526:541911254191125419585474Hahella chejuensis KCTC 2396, complete genomeTfp pilus assembly protein, major pilin PilA6e-0856.2
NC_008340:277223:284503284503285000498Alkalilimnicola ehrlichei MLHE-1, complete genomeFimbrial protein pilin1e-0755.5
NC_009656:5297000:530881553088155309354540Pseudomonas aeruginosa PA7 chromosome, complete genometype IV pilin structural subunit1e-0755.1
NC_019940:2546500:2547890254789025489121023Thioflavicoccus mobilis 8321 chromosome, complete genomeprepilin-type N-terminal cleavage/methylation domain-containing protein1e-0755.1
NC_008781:4178115:421160642116064212106501Polaromonas naphthalenivorans CJ2, complete genomeFimbrial protein pilin2e-0754.3
NC_010002:960027:970388970388970879492Delftia acidovorans SPH-1, complete genomepilin2e-0754.3
NC_015677:3965716:397561839756183976127510Ramlibacter tataouinensis TTB310 chromosome, complete genometype 4 fimbrial PilA3e-0753.9
NC_008322:3585601:359324635932463593647402Shewanella sp. MR-7, complete genomemethylation site containing protein4e-0753.5
NC_008752:5213431:522344652234465223952507Acidovorax avenae subsp. citrulli AAC00-1, complete genomeTfp pilus assembly protein major pilin PilA4e-0753.5
NC_010995:3197686:320885232088523209337486Cellvibrio japonicus Ueda107, complete genomeFimbrial protein precursor (Pilin)4e-0753.5
NC_015422:4822636:483340048334004833978579Alicycliphilus denitrificans K601 chromosome, complete genometype IV pilin structural subunit4e-0753.5
NC_020829:1068438:107537410753741075835462Pseudomonas denitrificans ATCC 13867, complete genomeTfp pilus assembly protein major pilin PilA4e-0753.5
NC_018080:5070687:507876450787645079303540Pseudomonas aeruginosa DK2 chromosome, complete genometype IV pilin structural subunit4e-0753.5
NC_013446:1173377:117929211792921179732441Comamonas testosteroni CNB-2, complete genomefimbrial protein pilin4e-0753.1
NC_010644:1491357:151093615109361511445510Elusimicrobium minutum Pei191, complete genomeTfp pilus assembly protein PilE-like protein5e-0753.1
NC_017267:2955946:296392029639202964375456Xanthomonas oryzae pv. oryzicola BLS256 chromosome, completetype IV pilin6e-0752.8
NC_008781:4178115:421223142122314212740510Polaromonas naphthalenivorans CJ2, complete genomeFimbrial protein pilin6e-0752.8
NC_006834:3422985:343006334300633430518456Xanthomonas oryzae pv. oryzae KACC10331, complete genometype IV pilin6e-0752.8
NC_018012:2327376:234146423414642341865402Thiocystis violascens DSM 198 chromosome, complete genomeprepilin-type N-terminal cleavage/methylation domain-containing protein6e-0752.8
NC_015138:5276857:528862052886205289141522Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completeFimbrial protein pilin9e-0752.4
NC_007973:499606:502738502738503157420Ralstonia metallidurans CH34 chromosome 1, complete sequenceFimbrial protein pilin1e-0652
NC_014315:2711852:272474127247412725169429Nitrosococcus watsoni C-113 chromosome, complete genomefimbrial protein pilin1e-0651.6
NC_014931:6415940:642952164295216430042522Variovorax paradoxus EPS chromosome, complete genomeprotein involved in methylation2e-0651.2
NC_010995:3197686:320944332094433209943501Cellvibrio japonicus Ueda107, complete genomepilin2e-0650.8
NC_008260:497855:509301509301509750450Alcanivorax borkumensis SK2, complete genomesecretion protein, putative2e-0650.8
NC_012791:5496175:550800155080015508525525Variovorax paradoxus S110 chromosome 1, complete genomeprotein involved in methylation3e-0650.8
NC_012660:3573154:357819835781983578647450Pseudomonas fluorescens SBW25 chromosome, complete genomegeneral secretion pathway protein G/T3e-0650.8
NC_010634:3509880:352505635250563525493438Yersinia pseudotuberculosis PB1/+, complete genomegeneral secretion pathway protein G3e-0650.4
NC_003143:875367:890531890531890968438Yersinia pestis CO92, complete genomegeneral secretion pathway protein G3e-0650.4
NC_004088:3505383:352055535205553520992438Yersinia pestis KIM, complete genomegeneral protein secretion protein3e-0650.4
NC_006155:3596120:361129636112963611733438Yersinia pseudotuberculosis IP 32953, complete genomegeneral secretion pathway protein G3e-0650.4
NC_008150:513783:529832529832530269438Yersinia pestis Antiqua, complete genomegeneral secretion pathway protein G3e-0650.4
NC_008149:3373229:338839333883933388830438Yersinia pestis Nepal516, complete genomegeneral secretion pathway protein G3e-0650.4
NC_010814:2217153:223456922345692234781213Geobacter lovleyi SZ, complete genomepilin domain protein4e-0650.4
NC_005810:3142384:315843931584393158876438Yersinia pestis biovar Microtus str. 91001, complete genomegeneral secretion pathway protein G3e-0650.4
NC_010159:3448490:346469434646943465131438Yersinia pestis Angola, complete genomegeneral secretion pathway protein G3e-0650.4
NC_010465:1118147:113490511349051135342438Yersinia pseudotuberculosis YPIII, complete genomegeneral secretion pathway protein G3e-0650.4
NC_017265:1000342:101639410163941016831438Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,general secretion pathway protein G3e-0650.4
NC_017168:199381:214306214306214743438Yersinia pestis A1122 chromosome, complete genomegeneral secretion pathway protein G3e-0650.4
NC_017160:1092839:110776611077661108203438Yersinia pestis D182038 chromosome, complete genomegeneral secretion pathway protein G3e-0650.4
NC_017154:1089044:110509311050931105530438Yersinia pestis D106004 chromosome, complete genomegeneral secretion pathway protein G3e-0650.4
NC_014029:1146900:116294911629491163386438Yersinia pestis Z176003 chromosome, complete genomegeneral secretion pathway protein G3e-0650.4
NC_009708:1131500:114644711464471146884438Yersinia pseudotuberculosis IP 31758 chromosome, complete genomegeneral secretion pathway protein G3e-0650.4
NC_009381:775357:790281790281790718438Yersinia pestis Pestoides F chromosome, complete genomegeneral secretion pathway protein G3e-0650.4
NC_008319:615135:624640624640625146507Synechococcus sp. CC9311, complete genomepossible pilin4e-0650.1
NC_015499:309394:323117323117323515399Thermodesulfobium narugense DSM 14796 chromosome, complete genomehypothetical protein4e-0650.1
NC_008740:979830:991389991389991847459Marinobacter aquaeolei VT8, complete genomegeneral secretion pathway protein H5e-0650.1
NC_007492:3655545:366053536605353660993459Pseudomonas fluorescens PfO-1, complete genomeGeneral secretion pathway protein G6e-0649.3
NC_017506:2504746:254285825428582543268411Marinobacter adhaerens HP15 chromosome, complete genomemethylation site containing protein7e-0649.3
NC_015581:1133775:115115911511591151596438Thioalkalimicrobium cyclicum ALM1 chromosome, complete genomegeneral secretion pathway protein G9e-0648.9