Pre_GI Gene

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Host: NC_009656 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_009656:5297000 Pseudomonas aeruginosa PA7 chromosome, complete genome

Host Lineage: Pseudomonas aeruginosa; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Non-respiratory clinical isolate from Argentina. Opportunistic pathogen. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is an opportunistic human pathogen. While it rarely infects healthy individuals, immunocompromised patients, like burn victims, AIDS-, cancer- or cystic fibrosis-patients are at increased risk for infection with this environmentally versatile bacteria. It is an important soil bacterium with a complex metabolism capable of degrading polycyclic aromatic hydrocarbons, and producing interesting, biologically active secondary metabolites including quinolones, rhamnolipids, lectins, hydrogen cyanide, and phenazines. Production of these products is likely controlled by complex regulatory networks making Pseudomonas aeruginosa adaptable both to free-living and pathogenic lifestyles. The bacterium is naturally resistant to many antibiotics and disinfectants, which makes it a difficult pathogen to treat.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
52971285297328201excisionaseQuickGO ontology
52974505297698249hypothetical protein
52977555297970216hypothetical protein
52980585298294237hypothetical proteinBLASTP
52983485298749402hypothetical proteinBLASTP
52991075299229123hypothetical protein
529976753009961230putative phage-like proteinQuickGO ontologyBLASTP
53009995301508510HK97 family phage prohead proteaseQuickGO ontologyBLASTP
530150553027431239HK97 family phage portal proteinQuickGO ontologyBLASTP
53027405303138399HNH endonucleaseQuickGO ontologyBLASTP
53032885303608321TerS proteinQuickGO ontologyBLASTP
530360553051011497phage terminase large subunitQuickGO ontologyBLASTP
53050985305373276hypothetical proteinBLASTP
53053705305684315phage head-tail adaptorQuickGO ontologyBLASTP
5305949530602476tRNA-ThrQuickGO ontologyBLASTP
53060995306827729type IV pilin accessory proteinQuickGO ontologyBLASTP
530683353087521920hypothetical proteinBLASTP
53088155309354540type IV pilin structural subunitQuickGO ontologyBLASTP
530952653112111686type 4 fimbrial biogenesis protein PilBQuickGO ontologyBLASTP
531121553124321218pilin biogenesis proteinQuickGO ontologyBLASTP
53124355313307873type 4 prepilin peptidase PilDQuickGO ontologyBLASTP
53133045313915612dephospho-CoA kinaseQuickGO ontologyBLASTP
53139125314112201zinc-binding proteinQuickGO ontologyBLASTP
53141505314359210hypothetical proteinBLASTP
53144655315154690hypothetical proteinBLASTP
53151515315627477hypothetical proteinBLASTP
53156245316049426hypothetical proteinBLASTP
53161815316810630hypothetical proteinBLASTP
53168075317247441hypothetical proteinBLASTP
53172825317452171hypothetical proteinBLASTP
531751653188231308NADH dehydrogenaseQuickGO ontologyBLASTP
531885853198891032AFG1 family ATPaseQuickGO ontologyBLASTP
532036153221211761polypeptide-transport-associated domain-containing proteinQuickGO ontologyBLASTP