Pre_GI Gene

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Host: NC_010322 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_010322:768849 Pseudomonas putida GB-1 chromosome, complete genome

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Pseudomonas putida strain GB-1, a fresh water, Gram-negative gamma-proteobacterium, is a genetically tractable, robust manganese (Mn) oxidizer, and as such, is an ideal model for unraveling the catalytic mechanism for, and the molecular regulation of Mn(IV) oxide production and its eventual accumulation on the cell surface at the onset of stationary phase. Since its isolation from Green Bay nearly 20 years ago by Ken Nealson’s group (then at the Center for Great Lakes Studies, Univ. Wisconsin-Milwaukee, USA), it has been the non spore-forming, model organism (along with the closely-related strain MnB1) for molecular genetic studies of Mn(II) oxidization, protein transport and biofilm formation and for biochemical studies on protein purification and Mn(III)-pyoverdine binding. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
768849769478630hypothetical proteinBLASTP
769576770259684hypothetical proteinBLASTP
770471770671201zinc-binding proteinQuickGO ontologyBLASTP
770668771291624dephospho-CoA kinaseQuickGO ontologyBLASTP
771291772157867prepilin peptidaseQuickGO ontologyBLASTP
773584773994411fimbrial protein pilinQuickGO ontologyBLASTP
77406677414176tRNA-ThrQuickGO ontologyBLASTP
7743087755131206integrase family proteinQuickGO ontologyBLASTP
775506776255750hypothetical protein
776374776583210phage transcriptional regulator AlpAQuickGO ontologyBLASTP
776862777506645hypothetical proteinBLASTP
777832778269438hypothetical protein
778305779192888phage integrase family proteinQuickGO ontologyBLASTP
7803407822801941hypothetical protein
783153783689537hypothetical protein
783809784414606hypothetical protein
785005785511507ECF subfamily RNA polymerase sigma-24 factorQuickGO ontologyBLASTP
785508786506999anti-FecI sigma factor FecRQuickGO ontologyBLASTP
7865897889942406TonB-dependent siderophore receptorQuickGO ontologyBLASTP
7892057916492445TonB-dependent siderophore receptorQuickGO ontologyBLASTP
791778792734957anti-FecI sigma factor FecRQuickGO ontologyBLASTP
792731793237507ECF subfamily RNA polymerase sigma-24 factorQuickGO ontologyBLASTP