Pre_GI: BLASTP Hits

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Query: NC_010322:768849:768849 Pseudomonas putida GB-1 chromosome, complete genome

Start: 768849, End: 769478, Length: 630

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Pseudomonas putida strain GB-1, a fresh water, Gram-negative gamma-proteobacterium, is a genetically tractable, robust manganese (Mn) oxidizer, and as such, is an ideal model for unraveling the catalytic mechanism for, and the molecular regulation of Mn(IV) oxide production and its eventual accumulation on the cell surface at the onset of stationary phase. Since its isolation from Green Bay nearly 20 years ago by Ken Nealson’s group (then at the Center for Great Lakes Studies, Univ. Wisconsin-Milwaukee, USA), it has been the non spore-forming, model organism (along with the closely-related strain MnB1) for molecular genetic studies of Mn(II) oxidization, protein transport and biofilm formation and for biochemical studies on protein purification and Mn(III)-pyoverdine binding. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017986:3407913:340791334079133408542630Pseudomonas putida ND6 chromosome, complete genomehypothetical protein5e-117419
NC_010501:4989455:501214950121495012778630Pseudomonas putida W619, complete genomeProtein of unknown function DUF17802e-114411
NC_008027:4953432:497306149730614973690630Pseudomonas entomophila L48, complete genomehypothetical protein1e-112405
NC_005773:951744:955865955865956494630Pseudomonas syringae pv. phaseolicola 1448A, complete genomehypothetical protein8e-104375
NC_009439:860571:865888865888866517630Pseudomonas mendocina ymp, complete genomehypothetical protein2e-100364
NC_015410:969526:971823971823972452630Pseudomonas mendocina NK-01 chromosome, complete genomehypothetical protein1e-99362
NC_018080:5070687:508743850874385088067630Pseudomonas aeruginosa DK2 chromosome, complete genomehypothetical protein1e-88325
NC_009656:5297000:531618153161815316810630Pseudomonas aeruginosa PA7 chromosome, complete genomehypothetical protein2e-87321