Pre_GI: BLASTP Hits

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Query: NC_007951:1928906:1949636 Burkholderia xenovorans LB400 chromosome 1, complete sequence

Start: 1949636, End: 1950214, Length: 579

Host Lineage: Burkholderia xenovorans; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Originally identified as Pseudomonas sp. LB400 that was found in contaminated soil in upstate New York, USA, this organism is now classified in the genus Burkholderia. Polychlorinated biphenyl-degrading bacterium. Member of the genus Burkholderia are versatile organisms that occupy a surprisingly wide range of ecological niches. These bacteria are exploited for biocontrol, bioremediation, and plant growth promotion purposes. Burkholderia xenovorans has been found on fungi, animals, and from human clinical isolates such as from cystic fibrosis (CF) patients. It may be tightly associated with white-rot fungus, as the degadation of lignin by the fungus results in aromatic compounds the bacterium can then degrade. This organism is exceptionally capable of degradation of polychlorinated biphenyls (PCBs), which are environmental pollutants, and thus it may play a role in bioremediation of polluted and toxic sites and is studied as a model bioremediator. PCBs can be utilized as the sole carbon and energy source by this organism. The pathways for degradation of PCBs have been extensively characterized at both the genetic and the molecular level and have become a model system for the bacterial breakdown of these very persistent environmental contaminants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007952:3196085:3195026319502631962311206Burkholderia xenovorans LB400 chromosome 2, complete sequenceputative transposase4e-79293
NC_008060:2913671:2927028292702829282901263Burkholderia cenocepacia AU 1054 chromosome 1, complete sequencetransposase IS116/IS110/IS9023e-73274
NC_007434:1322500:1349622134962213509381317Burkholderia pseudomallei 1710b chromosome I, complete sequenceTransposase8e-72269
NC_010084:1299387:1306852130685213080571206Burkholderia multivorans ATCC 17616 chromosome 1, completetransposase IS116/IS110/IS902 family protein2e-71268
NC_010801:550270:5818125818125830171206Burkholderia multivorans ATCC 17616 chromosome 3, completeISBmu10 transposase2e-71268
NC_010087:319063:3418413418413430461206Burkholderia multivorans ATCC 17616 chromosome 3, completetransposase IS116/IS110/IS902 family protein2e-71268
NC_010804:2206000:2216716221671622179211206Burkholderia multivorans ATCC 17616 chromosome 1, completeISBmu10 transposase2e-71268
NC_008253:3941938:3987475398747539886711197Escherichia coli 536, complete genomeputative transposase5e-61233
NC_010658:1772994:1785651178565117868471197Shigella boydii CDC 3083-94, complete genometransposase3e-60231
NC_010660:86445:9314693146943421197Shigella boydii CDC 3083-94 plasmid pBS512_211, complete sequencetransposase2e-60231
NC_008258:1934479:1935527193552719367231197Shigella flexneri 5 str. 8401, complete genomeISSfl2 ORF6e-60229
NC_007607:87000:1224321224321236281197Shigella dysenteriae Sd197 plasmid pSD1_197, complete sequenceISSfl2 ORF9e-60229
NC_015145:3657103:3677666367766636788651200Arthrobacter phenanthrenivorans Sphe3 chromosome, complete genometransposase2e-51201
NC_008537:12500:1657316573178381266Arthrobacter sp. FB24 plasmid 1, complete sequencetransposase, IS111A/IS1328/IS15339e-51199
NC_012803:1302261:1311276131127613125021227Micrococcus luteus NCTC 2665, complete genometransposase4e-48190
NC_014391:4617688:4619787461978746210101224Micromonospora aurantiaca ATCC 27029 chromosome, complete genometransposase IS116/IS110/IS902 family protein3e-47187
NC_009142:2725000:2743012274301227442291218Saccharopolyspora erythraea NRRL 2338, complete genometransposase IS116/IS110/IS902 family protein6e-45180
NC_016111:1904859:1908978190897819102791302Streptomyces cattleya NRRL 8057, complete genomehypothetical protein3e-44177
NC_007384:1763375:177004517700451770461417Shigella sonnei Ss046, complete genomeISSfl2 ORF2e-43175
NC_014218:1163513:1178727117872711799261200Arcanobacterium haemolyticum DSM 20595 chromosome, complete genometransposase IS116/IS110/IS902 family protein4e-40164
NC_008271:119957:1199571199571211321176Rhodococcus sp. RHA1 plasmid pRHL3, complete sequenceprobable transposase4e-39160
NC_013131:3473843:3476181347618134773801200Catenulispora acidiphila DSM 44928, complete genometransposase IS116/IS110/IS902 family protein4e-37154
NC_009142:5647737:564935756493575649965609Saccharopolyspora erythraea NRRL 2338, complete genomeputative IS110 transposase/integrase4e-37154
NC_003888:8594500:8609130860913086103471218Streptomyces coelicolor A3(2), complete genomeprobable IS110 transposase9e-35146
NC_003888:7028165:7057809705780970590261218Streptomyces coelicolor A3(2), complete genomeIS110 transposase/integrase9e-35146
NC_013929:1584906:1597557159755715987591203Streptomyces scabiei 87.22 chromosome, complete genometransposase2e-34144
NC_007164:622000:6289516289516301621212Corynebacterium jeikeium K411, complete genometransposase for IS3510d2e-33142
NC_008543:2696377:270755627075562707891336Burkholderia cenocepacia HI2424 chromosome 2, complete sequencetransposase IS116/IS110/IS902 family protein2e-30132
NC_008061:2548849:255909725590972559432336Burkholderia cenocepacia AU 1054 chromosome 2, complete sequencetransposase IS116/IS110/IS9022e-30131
NC_015673:2206881:2212642221264222138561215Corynebacterium resistens DSM 45100 chromosome, complete genometransposase for insertion sequence element6e-26117
NC_016785:161498:181021181021181488468Corynebacterium diphtheriae CDCE 8392 chromosome, complete genometransposase-like protein2e-1995.5
NC_018583:95388:985769857699028453Gordonia sp. KTR9 plasmid pGKT3, complete sequenceTransposase-like protein2e-1892.4
NC_016787:1782951:179752217975221797899378Corynebacterium diphtheriae HC03 chromosome, complete genometransposase-like protein1e-1789.7
NC_002944:2373873:2388971238897123901911221Mycobacterium avium subsp. paratuberculosis K-10, complete genomehypothetical protein2e-1789
NC_002944:1881405:1882374188237418835941221Mycobacterium avium subsp. paratuberculosis K-10, complete genomehypothetical protein2e-1789
NC_007164:1839154:1859120185912018603281209Corynebacterium jeikeium K411, complete genometransposase for IS3512c1e-1686.3
NC_015673:525638:5298365298365310441209Corynebacterium resistens DSM 45100 chromosome, complete genometransposase for insertion sequence element1e-1686.3
NC_016787:733685:7510667510667522741209Corynebacterium diphtheriae HC03 chromosome, complete genometransposase-like protein2e-1685.9
NC_016799:731849:7454017454017466091209Corynebacterium diphtheriae 31A chromosome, complete genometransposase-like protein2e-1685.5
NC_006087:2326143:2327614232761423288161203Leifsonia xyli subsp. xyli str. CTCB07, complete genometransposase, undefined3e-1684.7
NC_008703:31500:3294732947341521206Mycobacterium sp. KMS plasmid pMKMS01, complete sequencetransposase IS116/IS110/IS902 family protein6e-1684
NC_014811:166389:1674631674631686681206Mycobacterium sp. Spyr1 plasmid pMSPYR101, complete sequencetransposase6e-1684
NC_008703:31500:4552345523467281206Mycobacterium sp. KMS plasmid pMKMS01, complete sequencetransposase IS116/IS110/IS902 family protein6e-1684
NC_016822:1839739:184809118480911848417327Shigella sonnei 53G, complete genomeISSfl2 ORF6e-1683.6
NC_016802:1815098:183281618328161833145330Corynebacterium diphtheriae HC02 chromosome, complete genometransposase-like protein1e-1582.8
NC_016788:1785287:179959917995991799928330Corynebacterium diphtheriae HC04 chromosome, complete genometransposase-like protein8e-1580.1
NC_016790:1758000:177197217719721772301330Corynebacterium diphtheriae VA01 chromosome, complete genometransposase-like protein8e-1580.1
NC_016799:731849:748118748118748507390Corynebacterium diphtheriae 31A chromosome, complete genometransposase-like protein8e-1580.1
NC_016782:152764:163909163909164331423Corynebacterium diphtheriae 241 chromosome, complete genometransposase-like protein1e-1479.7
NC_010612:4654936:4671921467192146731261206Mycobacterium marinum M, complete genometransposase2e-1479.3
NC_002944:4163490:4183576418357641847841209Mycobacterium avium subsp. paratuberculosis K-10, complete genomeIS1110 transposase3e-1478.6
NC_015145:2693749:2712406271240627136081203Arthrobacter phenanthrenivorans Sphe3 chromosome, complete genometransposase4e-1477.8
NC_012522:7871173:789676878967687897541774Rhodococcus opacus B4, complete genomeputative transposase5e-1477.4
NC_015312:61752:7224072240734421203Pseudonocardia dioxanivorans CB1190 chromosome, complete genometransposase IS116/IS110/IS902 family protein5e-1477.4
NC_008537:12500:2948329483306761194Arthrobacter sp. FB24 plasmid 1, complete sequencetransposase IS116/IS110/IS902 family protein6e-1373.9
NC_014666:1844882:1861075186107518622711197Frankia sp. EuI1c chromosome, complete genometransposase IS116/IS110/IS902 family protein4e-1270.9
NC_014666:1601972:1613788161378816149841197Frankia sp. EuI1c chromosome, complete genometransposase IS116/IS110/IS902 family protein4e-1270.9
NC_016582:10326938:1033242710332427103336231197Streptomyces bingchenggensis BCW-1 chromosome, complete genomeIS116/IS110/IS902 family transposase6e-1270.5
NC_016111:2952338:2959354295935429605501197Streptomyces cattleya NRRL 8057, complete genomehypothetical protein2e-1168.6
NC_019673:2051363:2139699213969921409161218Saccharothrix espanaensis DSM 44229 complete genomehypothetical protein2e-1065.5
NC_009254:442360:451923451923452051129Burkholderia vietnamiensis G4 chromosome 3, complete sequence2e-1065.5
NC_012586:425615:4426694426694438471179Rhizobium sp. NGR234 plasmid pNGR234b, complete sequenceputative transposase for insertion sequence NGRIS-14a3e-1065.1
NC_013929:3722867:3749514374951437506591146Streptomyces scabiei 87.22 chromosome, complete genometransposase3e-1064.7
NC_013441:2788806:2820958282095828221811224Gordonia bronchialis DSM 43247, complete genometransposase IS111A/IS1328/IS15331e-0962.8
NC_008253:3122148:312997331299733130362390Escherichia coli 536, complete genomehypothetical protein6e-0960.5
NC_015859:1536439:155599215559921556978987Corynebacterium variabile DSM 44702 chromosome, complete genometransposase for insertion sequence element3e-0858.2
NC_016789:199503:219727219727219939213Corynebacterium diphtheriae PW8 chromosome, complete genometransposase-like protein3e-0858.2
NC_014314:1485500:150877615087761509729954Dehalogenimonas lykanthroporepellens BL-DC-9 chromosome, completetransposase IS116/IS110/IS902 family protein9e-0856.6
NC_016582:10159486:102085631020856310209084522Streptomyces bingchenggensis BCW-1 chromosome, complete genomeputative transposase9e-0856.6
NC_015673:397947:402560402560403480921Corynebacterium resistens DSM 45100 chromosome, complete genometransposase for insertion sequence element3e-0754.7
NC_015589:3241364:326757132675713268419849Desulfotomaculum ruminis DSM 2154 chromosome, complete genome7e-0753.9
NC_016800:694750:714651714651714890240Corynebacterium diphtheriae BH8 chromosome, complete genometransposase-like protein9e-0753.5
NC_016788:655175:676817676817677056240Corynebacterium diphtheriae HC04 chromosome, complete genometransposase-like protein9e-0753.5
NC_016789:224697:230091230091230393303Corynebacterium diphtheriae PW8 chromosome, complete genometransposase-like protein1e-0653.1
NC_016790:1758000:177147317714731772090618Corynebacterium diphtheriae VA01 chromosome, complete genometransposase-like protein1e-0653.1
NC_016788:1785287:179910017991001799717618Corynebacterium diphtheriae HC04 chromosome, complete genometransposase-like protein1e-0653.1
NC_003155:210240:2435812435812447711191Streptomyces avermitilis MA-4680, complete genomeIS110 family transposase1e-0653.1
NC_016800:694750:699944699944700891948Corynebacterium diphtheriae BH8 chromosome, complete genometransposase-like protein1e-0652.8
NC_015312:1265797:1280848128084812820591212Pseudonocardia dioxanivorans CB1190 chromosome, complete genometransposase IS111A/IS1328/IS15334e-0651.2