Pre_GI Gene

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Host: NC_013929 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_013929:1584906 Streptomyces scabiei 87.22 chromosome, complete genome

Host Lineage: Streptomyces scabiei; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a soil bacterium which is the causative agent of scab disease and affects a variety of underground vegetables such as potato and radish. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
15841241584909786ABC transporter permeaseQuickGO ontologyBLASTP
15849061585901996peptide ABC transporter ATP-binding proteinQuickGO ontologyBLASTP
15858981586689792ABC transporter ATP-binding proteinQuickGO ontologyBLASTP
15867631587239477hypothetical proteinBLASTP
158726315888221560hypothetical proteinBLASTP
15888821589460579TetR family transcriptional regulatorQuickGO ontologyBLASTP
15902551591166912hypothetical proteinBLASTP
159195515932351281hypothetical proteinBLASTP
15939791594176198hypothetical proteinBLASTP
15941671594637471hypothetical proteinBLASTP
159467215957421071transposaseQuickGO ontologyBLASTP
159615515972371083transposaseQuickGO ontologyBLASTP
159755715987591203transposaseQuickGO ontologyBLASTP
159905516022793225AcrBAcrDAcrF family proteinQuickGO ontologyBLASTP
16024761603150675two component system response regulatorQuickGO ontologyBLASTP
160314716041541008two component sensor kinaseQuickGO ontologyBLASTP