Pre_GI: BLASTP Hits

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Query: NC_005140:1820970:1843493 Vibrio vulnificus YJ016 chromosome II, complete sequence

Start: 1843493, End: 1844137, Length: 645

Host Lineage: Vibrio vulnificus; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This is a Biotype 1 hospital isolate from Taiwan. It contains larger chromosomes and >1000 genes as compared to Vibrio cholerae and contains a conjugative plasmid, pYJ016. There are numerous virulence factors including a cytolysin, protease, capsular polysaccharide as well as iron-uptake systems encoded in the genome. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Organisms of this species are opportunistic pathogens that can attack immunocompromised patients and causes gastroenteritis (inflammation of mucous membranes of stomach and intestine), wound infections, and primary septicemia (spread of the organism through the blood). This organism is the major cause of death from eating raw oysters, especially in people with liver damage. It only affects humans and other primates.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_004460:1237129:125917712591771259821645Vibrio vulnificus CMCP6 chromosome II, complete sequenceChemotaxis protein2e-121434
NC_012968:1352463:135673813567381357346609Methylotenera mobilis JLW8, complete genomeCheD, stimulates methylation of MCP protein1e-35149
NC_014323:4792048:483467548346754835286612Herbaspirillum seropedicae SmR1 chromosome, complete genomechemoreceptor glutamine deamidase4e-35147
NC_015222:1607757:161330516133051613916612Nitrosomonas sp. AL212 chromosome, complete genomeCheD2e-34145
NC_007298:778723:803115803115803720606Dechloromonas aromatica RCB, complete genomeCheD7e-34143
NC_015497:2997275:301504130150413015661621Glaciecola agarilytica 4H-3-7+YE-5 chromosome, complete genomeCheD2e-33142
NC_018607:921923:950130950130950723594Brachyspira pilosicoli B2904 chromosome, complete genomechemotaxis protein CheD1e-26119
NC_014330:505412:514323514323514916594Brachyspira pilosicoli 95/1000 chromosome, complete genomechemotaxis protein CheD1e-26119
NC_018604:1943561:194814019481401948733594Brachyspira pilosicoli WesB complete genomechemotaxis protein CheD1e-26119
NC_019908:121178:149850149850150443594Brachyspira pilosicoli P43/6/78 chromosome, complete genomechemotaxis protein CheD1e-26119
NC_009049:1125681:113783011378301138429600Rhodobacter sphaeroides ATCC 17029 chromosome 1, complete sequenceCheD, stimulates methylation of MCP proteins7e-26117
NC_017243:1698000:171175617117561712349594Brachyspira intermedia PWS/A chromosome, complete genomechemotaxis protein CheD3e-25114
NC_012225:569590:583560583560584153594Brachyspira hyodysenteriae WA1, complete genomechemotaxis protein CheD3e-25114
NC_009428:1827352:183982518398251840424600Rhodobacter sphaeroides ATCC 17025 chromosome, complete genomechemoreceptor glutamine deamidase CheD1e-24113
NC_008710:621822:638079638079638570492Borrelia turicatae 91E135, complete genomechemotaxis protein CheD8e-1890.1
NC_017095:166896:191016191016191495480Fervidobacterium pennivorans DSM 9078 chromosome, complete genomechemotaxis protein2e-1789.4
NC_000868:1502276:150970415097041510195492Pyrococcus abyssi GE5, complete genomechemotaxis protein ched5e-1787.8
NC_013849:933913:940008940008940478471Ferroglobus placidus DSM 10642 chromosome, complete genomeCheD6e-1787.4
NC_010516:2900057:292037129203712920859489Clostridium botulinum B1 str. Okra, complete genomechemotaxis protein CheD3e-1685.5
NC_010520:2937981:296072729607272961215489Clostridium botulinum A3 str. Loch Maree, complete genomechemotaxis protein CheD3e-1685.5
NC_012563:3090954:311531431153143115802489Clostridium botulinum A2 str. Kyoto, complete genomechemotaxis protein CheD3e-1685.5
NC_009495:2876865:290122529012252901713489Clostridium botulinum A str. ATCC 3502 chromosome, complete genomechemoreceptor glutamine deamidase CheD3e-1685.5
NC_009697:2790277:281463728146372815125489Clostridium botulinum A str. ATCC 19397 chromosome, completechemoreceptor glutamine deamidase CheD3e-1685.5
NC_009698:2727203:275156327515632752051489Clostridium botulinum A str. Hall chromosome, complete genomechemoreceptor glutamine deamidase CheD3e-1685.5
NC_009699:2901497:292490429249042925392489Clostridium botulinum F str. Langeland chromosome, complete genomechemoreceptor glutamine deamidase CheD3e-1685.5
NC_012658:2930244:295279929527992953287489Clostridium botulinum Ba4 str. 657 chromosome, complete genomechemoreceptor glutamine deamidase CheD3e-1685.5
NC_017297:2905138:292504129250412925529489Clostridium botulinum F str. 230613 chromosome, complete genomechemotaxis protein CheD3e-1685.5
NC_000961:435489:444354444354444842489Pyrococcus horikoshii OT3, complete genomehypothetical protein3e-1685.1
NC_015707:705628:706233706233706715483Thermotoga thermarum DSM 5069 chromosome, complete genomeCheD3e-1685.1
NC_015474:1035834:104675510467551047246492Pyrococcus sp. NA2 chromosome, complete genomechemoreceptor glutamine deamidase CheD4e-1684.7
NC_013741:1144592:116913511691351169605471Archaeoglobus profundus DSM 5631, complete genomeCheD, stimulates methylation of MCP protein3e-1581.6
NC_014328:1046958:105146610514661051954489Clostridium ljungdahlii ATCC 49587 chromosome, complete genomechemotaxis protein9e-1580.1
NC_015636:1455700:146394414639441464405462Methanothermococcus okinawensis IH1 chromosome, complete genomeCheD1e-1480.1
NC_014166:1751906:176804217680421768719678Arcobacter nitrofigilis DSM 7299 chromosome, complete genomeCheD protein2e-1479.3
NC_021184:2238500:224845222484522248952501Desulfotomaculum gibsoniae DSM 7213, complete genomechemotaxis protein3e-1478.6
NC_008346:983816:996088996088996573486Syntrophomonas wolfei subsp. wolfei str. Goettingen, completeCheD, stimulates methylation of MCP proteins4e-1477.8
NC_011653:1728000:174570517457051746187483Thermosipho africanus TCF52B, complete genomechemoreceptor glutamine deamidase CheD6e-1477.4
NC_000917:940088:945172945172945645474Archaeoglobus fulgidus DSM 4304, complete genomehypothetical protein9e-1477
NC_010001:3266561:327629132762913276776486Clostridium phytofermentans ISDg, complete genomeCheD8e-1477
NC_008593:1060548:107352910735291074017489Clostridium novyi NT, complete genomechemotaxis protein CheD2e-1375.9
NC_014377:1089894:109874010987401099225486Thermosediminibacter oceani DSM 16646 chromosome, complete genomeCheD2e-1375.9
NC_008570:1094442:111124211112421111712471Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genomeputative chemotaxis protein CheD7e-1373.9
NC_012660:5571500:559194555919455592478534Pseudomonas fluorescens SBW25 chromosome, complete genomechemoreceptor glutamine deamidase CheD7e-1373.9
NC_012778:841934:852522852522853013492Eubacterium eligens ATCC 27750, complete genomechemotaxis protein CheD9e-1270.1
NC_003901:1568000:157669115766911577170480Methanosarcina mazei Go1, complete genomechemoreceptor glutamine deamidase CheD1e-1169.7
NC_020389:1346358:135174813517481352227480Methanosarcina mazei Tuc01, complete genomeChemotaxis protein CheD1e-1169.7
NC_009617:4946000:496383149638314964319489Clostridium beijerinckii NCIMB 8052 chromosome, complete genomechemoreceptor glutamine deamidase CheD2e-1169.3
NC_016830:2642881:266974526697452670242498Pseudomonas fluorescens F113 chromosome, complete genomeprotein CheD24e-1168.2
NC_011832:1949717:196852919685291969023495Candidatus Methanosphaerula palustris E1-9c, complete genomeCheD1e-1066.2
NC_015138:3927411:392949639294963929978483Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completeCheD2e-1065.9
NC_011963:742158:752264752264752632369Rhodobacter sphaeroides KD131 chromosome 1, complete sequencechemoreceptor glutamine deamidase cheD2e-1065.9
NC_014831:2224733:224494822449482245556609Thermaerobacter marianensis DSM 12885 chromosome, complete genomeCheD4e-1064.7
NC_013173:1609123:161501116150111615547537Desulfomicrobium baculatum DSM 4028, complete genomeCheD, stimulates methylation of MCP proteins4e-1064.7
NC_021182:2921000:294471129447112945202492Clostridium pasteurianum BC1, complete genomechemotaxis protein7e-1063.9
NC_020291:4944835:500166550016655002153489Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeputative chemoreceptor glutamine deamidase CheD9e-1063.5
NC_008752:3902637:391887139188713919326456Acidovorax avenae subsp. citrulli AAC00-1, complete genome9e-1063.5
NC_012108:3878500:390060539006053901084480Desulfobacterium autotrophicum HRM2, complete genomeCheD12e-0962.4
NC_015172:1161000:116873911687391169203465Syntrophobotulus glycolicus DSM 8271 chromosome, complete genomeCheD3e-0961.6
NC_015391:2099472:210685221068522107334483Carnobacterium sp. 17-4 chromosome, complete genomesequence specific deamidase required for methylation of methyl-accepting chemotaxis proteins (MCPs) by CheR4e-0961.6
NC_015672:788417:797408797408797995588Flexistipes sinusarabici DSM 4947 chromosome, complete genomeCheD6e-0960.8
NC_019892:376000:395885395885396340456Singulisphaera acidiphila DSM 18658 chromosome, complete genomechemotaxis protein1e-0860.1