Pre_GI: BLASTP Hits

Some Help

Query: NC_004347:718091:734402 Shewanella oneidensis MR-1, complete genome

Start: 734402, End: 736645, Length: 2244

Host Lineage: Shewanella oneidensis; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from Oneida lake in New York, USA. Potential bioremediation organism. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. This organism is a facultative anaerobe that is capable of using a wide variety of terminal electron acceptors during anaerobic respiration which may make it valuable for bioremediation. Since the bacteria can reduce chromium and uranium from the liquid phase to form insoluble compounds, they may be used to eliminate these two environmental pollutants from water.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012667:839318:8430658430658451612097Vibrio cholerae MJ-1236 chromosome 2, complete genomeTonB-dependent heme and hemoglobin receptor HutA5e-47189
NC_012583:683887:6872566872566893522097Vibrio cholerae O395 chromosome chromosome II, complete sequenceheme transport protein HutA5e-47189
NC_009456:557962:5745905745905766862097Vibrio cholerae O395 chromosome 1, complete sequenceheme transport protein HutA5e-47189
NC_010694:1966676:1969966196996619723502385Erwinia tasmaniensis, complete genomeTonB-dependent haemoglobin/transferrin/lactoferrin receptor1e-26122
NC_011059:1391734:1398678139867814007742097Prosthecochloris aestuarii DSM 271, complete genomeTonB-dependent receptor5e-24113
NC_014800:329861:3473643473643493491986Pseudoalteromonas sp. SM9913 chromosome chromosome II, completeenterobactin receptor protein1e-20102
NC_010506:4873487:4873487487348748755322046Shewanella woodyi ATCC 51908, complete genomeTonB-dependent heme/hemoglobin receptor family protein5e-1687
NC_011026:2624775:2642802264280226449402139Chloroherpeton thalassium ATCC 35110, complete genomeTonB-dependent receptor plug3e-1481.3
CP002797:4603787:4627269462726946293592091Escherichia coli NA114, complete genomePutative colicin I receptor precursor8e-1479.7
NC_004431:3409389:3448776344877634508662091Escherichia coli CFT073, complete genomePutative receptor8e-1479.7
NC_011751:3453683:3470427347042734725172091Escherichia coli UMN026 chromosome, complete genomebifunctional enterobactin receptor/adhesin protein8e-1479.7
NC_007613:4403070:4403070440307044051602091Shigella boydii Sb227, complete genomeputative receptor8e-1479.7
NC_002695:1417912:1418370141837014204602091Escherichia coli O157:H7 str. Sakai, complete genomeIha8e-1479.7
NC_002655:1103991:1106535110653511086252091Escherichia coli O157:H7 EDL933, complete genomeputative receptor8e-1479.7
NC_013008:1354988:1362242136224213643322091Escherichia coli O157:H7 str. TW14359 chromosome, complete genomebifunctional enterobactin receptor/adhesin protein8e-1479.7
NC_013361:1335166:1338801133880113408912091Escherichia coli O26:H11 str. 11368 chromosome, complete genomebifunctional enterobactin receptor/adhesin protein8e-1479.7
NC_013364:1306756:1310392131039213124822091Escherichia coli O111:H- str. 11128, complete genomeputative adhesin8e-1479.7
NC_010939:1809446:1817087181708718197832697Actinobacillus pleuropneumoniae serovar 7 str. AP76, completetransferrin-binding protein 1 Tbp11e-1379.3
NC_010278:1749579:1753826175382617566212796Actinobacillus pleuropneumoniae serovar 3 str. JL03 chromosome,transferrin-binding protein 13e-1377.8
NC_015963:4500:2389923899259922094Enterobacter asburiae LF7a plasmid pENTAS01, complete sequenceTonB-dependent receptor7e-1376.6
NC_009053:1785447:1793088179308817958952808Actinobacillus pleuropneumoniae L20, complete genometransferrin-binding protein 1 Tbp11e-1275.9
NC_011742:3245500:3259200325920032612482049Escherichia coli S88 chromosome, complete genomeiron-regulated outer membrane virulence protein3e-1274.3
CP002797:4656327:4656327465632746583752049Escherichia coli NA114, complete genomePutative iron regulated outer membrane virulence protein3e-1274.3
NC_008563:3332114:3344416334441633464642049Escherichia coli APEC O1, complete genomeiron-regulated element3e-1274.3
NC_006511:4119332:4121860412186041237041845Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCvitamin B12 receptor protein2e-1172
NC_003198:3586000:3601247360124736030911845Salmonella enterica subsp. enterica serovar Typhi str. CT18,vitamin B12 receptor protein5e-1170.5
NC_012039:412837:4450004450004470962097Campylobacter lari RM2100, complete genomeiron-regulated outer membrane virulence protein, TonB receptor CfrA8e-1169.7
NC_015222:1492500:1506214150621415080671854Nitrosomonas sp. AL212 chromosome, complete genomeTonB-dependent vitamin B12 receptor8e-1169.7
NC_014910:3458475:3458475345847534602681794Alicycliphilus denitrificans BC chromosome, complete genometonb-dependent receptor plug8e-1169.7
CU928160:4248621:4252870425287042547141845Escherichia coli IAI1 chromosome, complete genomevitamin B12/cobalamin outer membrane transporter9e-1169.3
NC_000913:4159090:4161662416166241635061845Escherichia coli K12, complete genomevitamin B12/cobalamin outer membrane transporter9e-1169.3
NC_010473:4256000:4261359426135942632031845Escherichia coli str. K-12 substr. DH10B, complete genomevitamin B12/cobalamin outer membrane transporter9e-1169.3
NC_010468:4455201:4466591446659144684351845Escherichia coli ATCC 8739, complete genomeTonB-dependent vitamin B12 receptor9e-1169.3
NC_015422:1163752:1184048118404811858411794Alicycliphilus denitrificans K601 chromosome, complete genomeTonB-dependent receptor plug1e-1069.3
NC_014802:716699:7337307337307358322103Campylobacter jejuni subsp. jejuni ICDCCJ07001 chromosome, completeferric receptor CfrA2e-1068.2
NC_017279:692500:7091287091287112182091Campylobacter jejuni subsp. jejuni IA3902 chromosome, completeferric enterobactin uptake receptor3e-1067.8
NC_011296:1039749:1054056105405610562722217Thermodesulfovibrio yellowstonii DSM 11347, complete genomeTonB-dependent receptor3e-1067.8
NC_003912:767500:7838957838957859852091Campylobacter jejuni RM1221, complete genomeferric receptor CfrA4e-1067.4
NC_009439:918534:9185349185349207652232Pseudomonas mendocina ymp, complete genomeTonB-dependent receptor4e-1067.4
NC_002932:440191:4439944439944463332340Chlorobium tepidum TLS, complete genomereceptor, putative5e-1067
NC_017281:722000:7383457383457404352091Campylobacter jejuni subsp. jejuni S3 chromosome, complete genomeFerric receptor CfrA5e-1067
NC_002163:687925:7054507054507075402091Campylobacter jejuni subsp. jejuni NCTC 11168, complete genomeputative iron uptake protein4e-1067
NC_008686:1592073:1608270160827016103122043Paracoccus denitrificans PD1222 chromosome 1, complete sequenceTonB-dependent receptor, plug6e-1066.6
NC_009431:40917:4250742507446092103Rhodobacter sphaeroides ATCC 17025 plasmid pRSPA03, completehypothetical protein7e-1066.6
NC_012779:1820244:1837602183760218395991998Edwardsiella ictaluri 93-146, complete genomeTonB-dependent heme/hemoglobin receptor family protein1e-0965.9
NC_005810:3493607:3497913349791334998741962Yersinia pestis biovar Microtus str. 91001, complete genomevitamin B12/cobalamin outer membrane transporter1e-0965.5
NC_018080:3448392:3473901347390134758621962Pseudomonas aeruginosa DK2 chromosome, complete genomeTonB-dependent receptor2e-0965.5
NC_007912:909112:9325969325969345181923Saccharophagus degradans 2-40, complete genomeOuter membrane cobalamin receptor protein-like3e-0964.3
NC_014541:1617678:1638650163865016405631914Ferrimonas balearica DSM 9799 chromosome, complete genomeTonB-dependent receptor6e-0963.2
NC_009831:2045811:2059048205904820617292682Shewanella sediminis HAW-EB3, complete genomeTonB-dependent receptor, plug1e-0862.8
NC_009092:1935281:1940184194018419423162133Shewanella loihica PV-4, complete genomeTonB-dependent receptor1e-0862.4
NC_017187:691769:7017767017767040402265Arcobacter butzleri ED-1, complete genomeiron-regulated outer membrane virulence protein1e-0862
NC_013956:3273340:3296862329686232990692208Pantoea ananatis LMG 20103 chromosome, complete genomeCirA2e-0862
NC_016816:1137904:1139079113907911412532175Pantoea ananatis LMG 5342, complete genomeTonB-dependent siderophore receptor2e-0861.6
NC_009648:4656187:4660313466031346621691857Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomevitamin B12/cobalamin outer membrane transporter2e-0861.6
NC_015682:379373:3793733793733812321860Thermodesulfobacterium sp. OPB45 chromosome, complete genomeTonB-dependent receptor4e-0860.8
NC_004663:2246756:2251412225141222542612850Bacteroides thetaiotaomicron VPI-5482, complete genomeputative vitamin B12 receptor precursor4e-0860.8
NC_015160:1467445:1467445146744514695082064Odoribacter splanchnicus DSM 20712 chromosome, complete genomeTonB-dependent receptor plug4e-0860.8
NC_007722:2172000:2187721218772121896521932Erythrobacter litoralis HTCC2594, complete genomeTonB-dependent receptor5e-0860.5
NC_014012:3356629:3361888336188833648092922Shewanella violacea DSS12, complete genomeTonB-dependent receptor6e-0860.1
NC_011750:1094000:1111646111164611138202175Escherichia coli IAI39 chromosome, complete genomeputative outer membrane receptor for iron compound or colicin1e-0759.3
NC_007946:2155454:2173489217348921756362148Escherichia coli UTI89, complete genomeputative outer membrane receptor for iron compound or colicin1e-0759.3
CP002797:2062006:2068426206842620705732148Escherichia coli NA114, complete genomehypothetical protein1e-0759.3
NC_004431:2304280:2322324232232423244712148Escherichia coli CFT073, complete genomePutative outer membrane receptor for iron compound or colicin1e-0759.3
NC_008253:2056734:2074801207480120769482148Escherichia coli 536, complete genomeputative outer membrane receptor for iron compound or colicin1e-0759.3
NC_015311:813989:8280538280538302092157Prevotella denticola F0289 chromosome, complete genomeTonB-dependent receptor1e-0759.3
NC_009615:711125:7111257111257129961872Parabacteroides distasonis ATCC 8503 chromosome, complete genomeTonB-dependent outer membrane receptor protein1e-0758.9
NC_008321:2190000:2207398220739822100702673Shewanella sp. MR-4, complete genomeTonB-dependent receptor1e-0758.9
NC_018645:4945698:4966070496607049681062037Desulfobacula toluolica Tol2, complete genomeTonB-dependent receptor3e-0757.8
NC_013520:120214:1347501347501366181869Veillonella parvula DSM 2008, complete genomeTonB-dependent receptor3e-0757.8
NC_015572:3723498:3736699373669937388792181Methylomonas methanica MC09 chromosome, complete genomeTonB-dependent siderophore receptor4e-0757.4
NC_004347:3028000:3034793303479330374472655Shewanella oneidensis MR-1, complete genomeTonB-dependent receptor domain protein4e-0757.4
NC_013353:2455052:246251124625112463056546Escherichia coli O103:H2 str. 12009, complete genome5e-0757
AP010958:2455052:246251124625112463056546Escherichia coli O103:H2 str. 12009 DNA, complete genome5e-0757
NC_010688:2052619:2054809205480920577092901Xanthomonas campestris pv. campestris, complete genomeTonB-dependent outer membrane receptor precursor5e-0757
NC_008782:1136732:1149951114995111518311881Acidovorax sp. JS42, complete genomeTonB-dependent receptor8e-0756.6
NC_011992:1038985:1052210105221010540901881Acidovorax ebreus TPSY, complete genomeTonB-dependent receptor7e-0756.6
NC_016776:3181706:3186704318670431888482145Bacteroides fragilis 638R, complete genomeputative exported TonB-dependent receptor protein6e-0756.6
NC_003228:3143470:3149210314921031513542145Bacteroides fragilis NCTC 9343, complete genomeputative exported TonB-dependent receptor protein6e-0756.6
NC_006347:3082921:3087919308791930900632145Bacteroides fragilis YCH46, complete genomeTonB-dependent receptor6e-0756.6
NC_007947:1703326:1713414171341417158162403Methylobacillus flagellatus KT, complete genomeTonB-dependent receptor, plug1e-0656.2
NC_016513:16721:2621026210281621953Aggregatibacter actinomycetemcomitans ANH9381 chromosome, completeouter membrane protein 641e-0656.2
NC_013416:1783349:1800641180064118025931953Aggregatibacter actinomycetemcomitans D11S-1, complete genomeouter membrane protein 649e-0756.2
NC_010725:4035397:4053757405375740557241968Methylobacterium populi BJ001, complete genomeTonB-dependent receptor plug9e-0756.2
NC_014973:3151701:3151701315170131536591959Geobacter sp. M18 chromosome, complete genomeTonB-dependent receptor9e-0756.2
NC_015144:124500:1427581427581449292172Weeksella virosa DSM 16922 chromosome, complete genomeTonB-dependent receptor plug2e-0655.1
NC_014935:1834569:1853521185352118553441824Nitratifractor saLSUginis DSM 16511 chromosome, complete genometonb-dependent receptor plug2e-0655.1
NC_012731:3411161:3433588343358834357622175Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomeouter membrane receptor FepA2e-0655.1
NC_003919:2956404:2970504297050429733982895Xanthomonas axonopodis pv. citri str. 306, complete genomeTonB-dependent receptor3e-0654.7
NC_010498:1117938:1147385114738511495312147Escherichia coli SMS-3-5, complete genome3e-0654.7
NC_017518:1610803:1625543162554316283772835Neisseria meningitidis NZ-05/33 chromosome, complete genomelactoferrin-binding protein A2e-0654.7
NC_016027:1357659:1384946138494613870452100Gluconacetobacter xylinus NBRC 3288, complete genomeTonB-dependent ferrichrome siderophore receptor3e-0654.3
NC_003112:1594000:1594478159447815973092832Neisseria meningitidis MC58, complete genomelactoferrin-binding protein A4e-0654.3
NC_013192:618936:6205856205856226752091Leptotrichia buccalis DSM 1135, complete genomeouter membrane insertion C-terminal signal5e-0653.9
NC_011144:2770842:2785652278565227878982247Phenylobacterium zucineum HLK1, complete genomeTonB-dependent receptor5e-0653.9
NC_007951:1042291:1059087105908710609581872Burkholderia xenovorans LB400 chromosome 1, complete sequencePutative outer membrane cobalamin receptor, TonB dependent4e-0653.9
NC_011026:1181940:1192050119205011943712322Chloroherpeton thalassium ATCC 35110, complete genomeTonB-dependent siderophore receptor4e-0653.9
NC_011663:3181579:3188125318812531909322808Shewanella baltica OS223 chromosome, complete genomeTonB-dependent receptor4e-0653.9
NC_015276:855150:8702618702618721921932Marinomonas mediterranea MMB-1 chromosome, complete genomeTonB-dependent receptor6e-0653.5
NC_015580:3834244:3835273383527338375882316Novosphingobium sp. PP1Y, complete genomeTonB-dependent receptor6e-0653.5
NC_014934:1315106:1333127133312713358742748Cellulophaga algicola DSM 14237 chromosome, complete genometonb-dependent receptor5e-0653.5
NC_021150:1322000:1355109135510913571572049Azotobacter vinelandii CA6, complete genomeTonB-dependent receptor5e-0653.5
NC_012560:1322000:1355097135509713571452049Azotobacter vinelandii DJ, complete genomeTonB-dependent receptor5e-0653.5
NC_006625:1:1366613666158402175Klebsiella pneumoniae NTUH-K2044 plasmid pK2044, complete sequenceouter membrane receptor FepA7e-0653.1
NC_008322:1186000:1208307120830712104812175Shewanella sp. MR-7, complete genomeTonB-dependent siderophore receptor8e-0653.1
NC_016147:513819:5351035351035378862784Pseudoxanthomonas spadix BD-a59 chromosome, complete genomeTonB-dependent receptor8e-0653.1