Pre_GI: BLASTN Hits

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Query: NC_015410:1202370 Pseudomonas mendocina NK-01 chromosome, complete genome

Start: 1202370, End: 1228248, Length: 25879

Host Lineage: Pseudomonas mendocina; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. Pseudomonas mendocin is a pentachlorophenol (PCP)-degrading bacterium was isolated from PCP-contaminated soil. It is able to act as a bioremediation agent without the accumulation of inhibitory toxic compounds.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_009439:1174432*1174432119973625305Pseudomonas mendocina ymp, complete genome06871BLASTN svgBLASTP svg
NC_015410:3502099*3502099352815926061Pseudomonas mendocina NK-01 chromosome, complete genome01784BLASTN svgBLASTP svg
NC_015410:2838132*2838132286405125920Pseudomonas mendocina NK-01 chromosome, complete genome01687BLASTN svgBLASTP svg
NC_008027:896000*89600091964923650Pseudomonas entomophila L48, complete genome01546BLASTN svgBLASTP svg
NC_009439:2337024*2337024236235425331Pseudomonas mendocina ymp, complete genome01544BLASTN svgBLASTP svg
NC_015733:864959*86495989931634358Pseudomonas putida S16 chromosome, complete genome01185BLASTN svgBLASTP svg
NC_009434:3413461*3413461343258419124Pseudomonas stutzeri A1501, complete genome01148BLASTN svgBLASTP svg
NC_009434:3434381*3434381346411529735Pseudomonas stutzeri A1501, complete genome01090BLASTN svgBLASTP svg
NC_012660:819381*81938184312223742Pseudomonas fluorescens SBW25 chromosome, complete genome0892BLASTN svgBLASTP svg
NC_020209:47504*4750412622978726Pseudomonas poae RE*1-1-14, complete genome0874BLASTN svgBLASTP svg
NC_004578:1190000*1190000121945029451Pseudomonas syringae pv. tomato str. DC3000, complete genome4e-178632BLASTN svgBLASTP svg
NC_015410:1324313*1324313135087526563Pseudomonas mendocina NK-01 chromosome, complete genome3e-157563BLASTN svgBLASTP svg
NC_015740:34862263486226350909922874Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, complete1e-67266BLASTN svgBLASTP svg
NC_002927:960369*96036999159931231Bordetella bronchiseptica RB50, complete genome3e-65258BLASTN svgBLASTP svg
NC_002929:3305682*3305682333485129170Bordetella pertussis Tohama I, complete genome2e-62248BLASTN svgBLASTP svg
NC_008463:43421194342119436920327085Pseudomonas aeruginosa UCBPP-PA14, complete genome1e-61246BLASTN svgBLASTP svg
NC_002516:77678777678780223925453Pseudomonas aeruginosa PAO1, complete genome2e-59238BLASTN svgBLASTP svg
NC_011770:45421834542183456916026978Pseudomonas aeruginosa LESB58, complete genome9e-59236BLASTN svgBLASTP svg
NC_020064:2697116*2697116272016423049Serratia marcescens FGI94, complete genome1e-51212BLASTN svgBLASTP svg
NC_014323:46656104665610471710351494Herbaspirillum seropedicae SmR1 chromosome, complete genome5e-45190BLASTN svgBLASTP svg
NC_010995:764567*76456778991125345Cellvibrio japonicus Ueda107, complete genome2e-44188BLASTN svgBLASTP svg
NC_013508:1491945*1491945152068628742Edwardsiella tarda EIB202, complete genome5e-42180BLASTN svgBLASTP svg
NC_013446:45116024511602453459922998Comamonas testosteroni CNB-2, complete genome3e-37165BLASTN svgBLASTP svg
NC_012969:2136243*2136243222535089108Methylovorus glucosetrophus SIP3-4 chromosome, complete genome4e-36161BLASTN svgBLASTP svg
NC_012856:29319952931995295427722283Ralstonia pickettii 12D chromosome 1, complete genome2e-35159BLASTN svgBLASTP svg
NC_010170:4196197*4196197422572429528Bordetella petrii, complete genome7e-35157BLASTN svgBLASTP svg
NC_021066:839734*83973487672436991Raoultella ornithinolytica B6, complete genome7e-35157BLASTN svgBLASTP svg
NC_014733:2095996*2095996211863222637Methylovorus sp. MP688 chromosome, complete genome1e-33153BLASTN svgBLASTP svg
NC_010170:4800000*48000004908823108824Bordetella petrii, complete genome1e-30143BLASTN svgBLASTP svg
NC_015663:3586836*3586836361030823473Enterobacter aerogenes KCTC 2190 chromosome, complete genome2e-29139BLASTN svgBLASTP svg
NC_014500:2479814*2479814250755827745Dickeya dadantii 3937 chromosome, complete genome3e-28135BLASTN svgBLASTP svg
NC_004547:2470978*2470978249481623839Erwinia carotovora subsp. atroseptica SCRI1043, complete genome1e-27133BLASTN svgBLASTP svg
NC_015593:2447844*2447844246959921756Sphingobium chlorophenolicum L-1 chromosome chromosome 1, complete2e-26129BLASTN svgBLASTP svg
NC_014121:1589389*1589389162248733099Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, complete6e-26127BLASTN svgBLASTP svg
NC_010645:558974*55897458259923626Bordetella avium 197N, complete genome6e-26127BLASTN svgBLASTP svg
NC_013961:1622616*1622616167386551250Erwinia amylovora, complete genome1e-24123BLASTN svgBLASTP svg
NC_011420:2692857*2692857271509922243Rhodospirillum centenum SW, complete genome4e-24121BLASTN svgBLASTP svg
NC_012587:1181004*1181004120298621983Rhizobium sp. NGR234, complete genome2e-23119BLASTN svgBLASTP svg
NC_002927:383760*38376040679123032Bordetella bronchiseptica RB50, complete genome2e-22115BLASTN svgBLASTP svg
NC_010067:11161481116148113933023183Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, complete2e-22115BLASTN svgBLASTP svg
NC_010725:2589014*2589014261596126948Methylobacterium populi BJ001, complete genome9e-22113BLASTN svgBLASTP svg
NC_014935:15118351511835153500523171Nitratifractor saLSUginis DSM 16511 chromosome, complete genome4e-21111BLASTN svgBLASTP svg
NC_013421:2613137*2613137263682223686Pectobacterium wasabiae WPP163, complete genome6e-20107BLASTN svgBLASTP svg
NC_010694:21380002138000218529147292Erwinia tasmaniensis, complete genome6e-20107BLASTN svgBLASTP svg
NC_003198:1771432*1771432180593534504Salmonella enterica subsp. enterica serovar Typhi str. CT18,6e-20107BLASTN svgBLASTP svg
NC_008048:2838769*2838769286662127853Sphingopyxis alaskensis RB2256, complete genome2e-19105BLASTN svgBLASTP svg
NC_015731:3658956*3658956368280423849Nitrosomonas sp. Is79A3 chromosome, complete genome2e-19105BLASTN svgBLASTP svg
NC_012587:2744731*2744731277030625576Rhizobium sp. NGR234, complete genome9e-19103BLASTN svgBLASTP svg
NC_004631:1182883*1182883121459931717Salmonella enterica subsp. enterica serovar Typhi Ty2, complete9e-19103BLASTN svgBLASTP svg
NC_008340:2034810*2034810206790533096Alkalilimnicola ehrlichei MLHE-1, complete genome4e-18101BLASTN svgBLASTP svg
NC_015161:758929*75892978593127003Deinococcus proteolyticus MRP chromosome, complete genome1e-1799.6BLASTN svgBLASTP svg
NC_011985:3282924*3282924330901226089Agrobacterium radiobacter K84 chromosome 1, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_007576:435713*43571345815822446Lactobacillus sakei subsp. sakei 23K, complete genome9e-1693.7BLASTN svgBLASTP svg
NC_015224:2095816*2095816211873722922Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,3e-1591.7BLASTN svgBLASTP svg
NC_013716:1918664*1918664194320924546Citrobacter rodentium ICC168, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_010804:2960352*2960352297848118130Burkholderia multivorans ATCC 17616 chromosome 1, complete2e-1385.7BLASTN svgBLASTP svg
NC_007576:1564739*1564739158846023722Lactobacillus sakei subsp. sakei 23K, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_014210:14403614403616380119766Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,8e-1383.8BLASTN svgBLASTP svg
NC_011769:24720224720227380526604Desulfovibrio vulgaris str. 'Miyazaki F', complete genome3e-1281.8BLASTN svgBLASTP svg
NC_006677:1255079*1255079128032225244Gluconobacter oxydans 621H, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_001263:13786051378605140253323929Deinococcus radiodurans R1 chromosome 1, complete sequence1e-1179.8BLASTN svgBLASTP svg
NC_003047:2798367*2798367282259924233Sinorhizobium meliloti 1021, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_015589:1630461*1630461165846428004Desulfotomaculum ruminis DSM 2154 chromosome, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_013172:25565172556517257961323097Brachybacterium faecium DSM 4810, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_005125:76072176072180474844028Gloeobacter violaceus PCC 7421, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_007404:974461974461101843943979Thiobacillus denitrificans ATCC 25259, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_007626:1746475*1746475178760841134Magnetospirillum magneticum AMB-1, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_007643:4294818*4294818431506320246Rhodospirillum rubrum ATCC 11170, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_012214:2221702*2221702227363551934Erwinia pyrifoliae Ep1/96, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_014391:60008346000834602389723064Micromonospora aurantiaca ATCC 27029 chromosome, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_015458:2614108*2614108264388729780Pusillimonas sp. T7-7 chromosome, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_015953:47469834746983477386726885Streptomyces sp. SirexAA-E chromosome, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_020302:10741201074120109337319254Corynebacterium halotolerans YIM 70093 = DSM 44683, complete8e-1073.8BLASTN svgBLASTP svg
NC_015976:3924962*3924962394896824007Sphingobium sp. SYK-6, complete genome8e-1073.8BLASTN svgBLASTP svg
NC_013521:29245402924540295147426935Sanguibacter keddieii DSM 10542, complete genome8e-1073.8BLASTN svgBLASTP svg
NC_010634:2252329*2252329227409821770Yersinia pseudotuberculosis PB1/+, complete genome8e-1073.8BLASTN svgBLASTP svg
NC_008254:3246306*3246306327014823843Mesorhizobium sp. BNC1, complete genome8e-1073.8BLASTN svgBLASTP svg
NC_006155:23341222334122235510620985Yersinia pseudotuberculosis IP 32953, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_008525:1493317*1493317151610022784Pediococcus pentosaceus ATCC 25745, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_013729:59820005982000600426322264Kribbella flavida DSM 17836, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_007912:41259704125970415108425115Saccharophagus degradans 2-40, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_005125:34202703420270344513224863Gloeobacter violaceus PCC 7421, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_014215:18410641841064186318122118Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1,5e-0867.9BLASTN svgBLASTP svg
NC_014973:3151701*3151701317705425354Geobacter sp. M18 chromosome, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_015573:569625*56962560324033616Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_018750:50787055078705510289824194Streptomyces venezuelae ATCC 10712, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_003063:757999*75799978308325085Agrobacterium tumefaciens str. C58 chromosome linear, complete5e-0867.9BLASTN svgBLASTP svg
NC_008570:3777469*3777469380230024832Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_004369:86889086889089511826229Corynebacterium efficiens YS-314, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_008380:4532969*4532969455742124453Rhizobium leguminosarum bv. viciae 3841, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_010814:2758902*2758902278690628005Geobacter lovleyi SZ, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_010994:4071131*4071131409424623116Rhizobium etli CIAT 652, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_012559:23095662309566233407924514Laribacter hongkongensis HLHK9, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_015978:412856*41285644063427779Lactobacillus sanfranciscensis TMW 1.1304 chromosome, complete8e-0763.9BLASTN svgBLASTP svg
NC_007618:1792500*1792500182000027501Brucella melitensis biovar Abortus 2308 chromosome I, complete3e-0661.9BLASTN svgBLASTP svg
NC_007929:1290568*1290568131407323506Lactobacillus salivarius subsp. salivarius UCC118, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_007929:1805000*1805000183399929000Lactobacillus salivarius subsp. salivarius UCC118, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_010103:1777000*1777000180418827189Brucella canis ATCC 23365 chromosome I, complete sequence3e-0661.9BLASTN svgBLASTP svg
NC_010162:10208521102085211023231523795Sorangium cellulosum 'So ce 56', complete genome3e-0661.9BLASTN svgBLASTP svg
NC_010169:1599936*1599936162443724502Brucella suis ATCC 23445 chromosome I, complete sequence3e-0661.9BLASTN svgBLASTP svg
NC_013205:2610956*2610956266117350218Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446,3e-0661.9BLASTN svgBLASTP svg
NC_016025:59667059667062579729128Candidatus Chloracidobacterium thermophilum B chromosome chromosome3e-0661.9BLASTN svgBLASTP svg
NC_004310:1777721*1777721180601328293Brucella suis 1330 chromosome I, complete sequence3e-0661.9BLASTN svgBLASTP svg