Pre_GI Gene

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Host: NC_007912 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_007912:4125970 Saccharophagus degradans 2-40, complete genome

Host Lineage: Saccharophagus degradans; Saccharophagus; Alteromonadaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain is a marine gamma-proteobacterium that was isolated from decaying Spartina alterniflora, a salt marsh cord grass, in the Chesapeake Bay, USA. Saccharophagus degradans 2-40 has been used to produce ethanol from plant material and may be useful for the production bioethanol. Bacterium able to degrade complex carbohydrates. Saccharophagus degradans is capable of degrading insoluble complex carbohydrates through the collective action of enzyme complexes found on its cell surfaces, utilizing the degradation products as a carbon source. This organism may be useful in bioremediation. The degradative enzymes this organism produces are typically exoenzymes that are collected and organized into large surface complexes termed cellulosomes.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
412597041278621893CellulaseQuickGO ontologyBLASTP
412832041302781959hypothetical proteinBLASTP
413071341326291917CellulaseQuickGO ontologyBLASTP
41339354134276342Prolyl 4-hydroxylase alpha subunitQuickGO ontology
41344934134795303hypothetical proteinBLASTP
41348834135263381Parallel beta-helix repeatQuickGO ontologyBLASTP
41356414135988348hypothetical proteinBLASTP
41360354136424390Triosephosphate isomeraseQuickGO ontologyBLASTP
41369604137274315hypothetical proteinBLASTP
41376204137958339Fructose-bisphosphate aldolase class IIQuickGO ontologyBLASTP
413975441472957542Rhs family protein-likeQuickGO ontologyBLASTP
41478694148735867protein methyltransferase hemKQuickGO ontologyBLASTP
414872841498101083peptide chain release factor 1QuickGO ontologyBLASTP
414980741510841278Parallel beta-helix repeatQuickGO ontologyBLASTP