Pre_GI Gene

Some Help

Host: NC_002929 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_002929:3305682 Bordetella pertussis Tohama I, complete genome

Host Lineage: Bordetella pertussis; Bordetella; Alcaligenaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: This strain was originally isolated from a patient with whooping cough and has been studied extensively for over 40 years. Causative agent of whooping cough. This group of organisms is capable of invading the respiratory tract of animals and causing severe diseases. They express a number of virulence factors in order to do this including filamentous hemagglutins for attachment, cytotoxins, and proteins that form a type III secretion system for transport of effector molecules into host cells. This organism, which is unable to persist in the environment, is a strict human pathogen that causes whooping cough. Once a common cause of death in children the development of a vaccine has greatly decreased the number of deaths due to Bordetella pertussis. However, this organism infects and estimated 39 million people and kills hundreds of thousands of people each year.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
330568233073371656putative gamma-glutamyltranspeptidaseQuickGO ontologyBLASTP
33073923307733342hypothetical proteinBLASTP
330774733091861440hypothetical proteinBLASTP
33093193310158840probable MerR-family transcriptional regulatorQuickGO ontologyBLASTP
33103283311278951transposaseQuickGO ontologyBLASTP
33146553315605951transposaseQuickGO ontologyBLASTP
331578933170001212hypothetical proteinBLASTP
331701633199672952putative modification methylaseQuickGO ontologyBLASTP
331996933230883120putative restriction endonucleaseQuickGO ontologyBLASTP
332323633242821047hypothetical proteinBLASTP
332462433257511128putative integraseQuickGO ontologyBLASTP
332603133271221092hypothetical proteinBLASTP
33271953327977783hypothetical proteinBLASTP
33279743328570597peptidyl-tRNA hydrolaseQuickGO ontologyBLASTP
3328699332932562750S ribosomal protein L25QuickGO ontologyBLASTP
33294363330386951ribose-phosphate pyrophosphokinaseQuickGO ontologyBLASTP
3330517333059377tRNA-GlnQuickGO ontologyBLASTP
333059533314949004-diphosphocytidyl-2-C-methyl-D-erythritol kinaseQuickGO ontologyBLASTP
33315433332142600outer membrane lipoprotein LolB precursorQuickGO ontologyBLASTP
333213933340251887hypothetical proteinBLASTP
33340243334851828formamidopyrimidine-DNA glycosylaseQuickGO ontologyBLASTP