Pre_GI: BLASTN Hits

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Query: NC_013353:5272863 Escherichia coli O103:H2 str. 12009, complete genome

Start: 5272863, End: 5294599, Length: 21737

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
AP010958:52728635272863529459921737Escherichia coli O103:H2 str. 12009 DNA, complete genome022410BLASTN svgBLASTP svg
CU928160:4570498*4570498461509944602Escherichia coli IAI1 chromosome, complete genome07402BLASTN svgBLASTP svg
NC_009800:4529504*4529504454809918596Escherichia coli HS, complete genome06605BLASTN svgBLASTP svg
CP002516:41991334199133422817229040Escherichia coli KO11, complete genome06462BLASTN svgBLASTP svg
CP002185:47918114791811481779025980Escherichia coli W, complete genome06462BLASTN svgBLASTP svg
NC_007613:44030704403070442929526226Shigella boydii Sb227, complete genome06246BLASTN svgBLASTP svg
NC_009801:48826844882684490824525562Escherichia coli E24377A, complete genome06217BLASTN svgBLASTP svg
NC_011750:49780004978000500028022281Escherichia coli IAI39 chromosome, complete genome06197BLASTN svgBLASTP svg
NC_008253:48178644817864486276044897Escherichia coli 536, complete genome06007BLASTN svgBLASTP svg
NC_008563:49051864905186492360518420Escherichia coli APEC O1, complete genome05993BLASTN svgBLASTP svg
NC_007946:48759974875997491969643700Escherichia coli UTI89, complete genome05993BLASTN svgBLASTP svg
NC_011751:50705975070597508906918473Escherichia coli UMN026 chromosome, complete genome05735BLASTN svgBLASTP svg
NC_010473:46303614630361465014819788Escherichia coli str. K-12 substr. DH10B, complete genome05735BLASTN svgBLASTP svg
NC_000913:45282784528278455238424107Escherichia coli K12, complete genome05735BLASTN svgBLASTP svg
AC_000091:45349354534935455904124107Escherichia coli W3110 DNA, complete genome05735BLASTN svgBLASTP svg
NC_004431:51233255123325514909025766Escherichia coli CFT073, complete genome05721BLASTN svgBLASTP svg
NC_002695:5381576*5381576540611824543Escherichia coli O157:H7 str. Sakai, complete genome05685BLASTN svgBLASTP svg
NC_010498:49306494930649495591925271Escherichia coli SMS-3-5, complete genome05636BLASTN svgBLASTP svg
NC_008258:4345400*4345400436989824499Shigella flexneri 5 str. 8401, complete genome05566BLASTN svgBLASTP svg
NC_004741:4364235*4364235438964325409Shigella flexneri 2a str. 2457T, complete genome05551BLASTN svgBLASTP svg
NC_004337:4374500*4374500439909924600Shigella flexneri 2a str. 301, complete genome05551BLASTN svgBLASTP svg
CP002797:46563274656327468071624390Escherichia coli NA114, complete genome05444BLASTN svgBLASTP svg
NC_020064:3609844*3609844365321743374Serratia marcescens FGI94, complete genome03497BLASTN svgBLASTP svg
NC_015663:54942554942558284933425Enterobacter aerogenes KCTC 2190 chromosome, complete genome01021BLASTN svgBLASTP svg
NC_010498:48991674899167492274523579Escherichia coli SMS-3-5, complete genome0779BLASTN svgBLASTP svg
NC_002655:53825575382557540664224086Escherichia coli O157:H7 EDL933, complete genome3e-117430BLASTN svgBLASTP svg
NC_002695:53525545352554537663924086Escherichia coli O157:H7 str. Sakai, complete genome3e-117430BLASTN svgBLASTP svg
NC_010468:4252940*4252940428159928660Escherichia coli ATCC 8739, complete genome3e-117430BLASTN svgBLASTP svg
NC_020181:51305135130513517631045798Enterobacter aerogenes EA1509E, complete genome9e-74285BLASTN svgBLASTP svg
NC_020260:603796*60379665197748182Cronobacter sakazakii Sp291, complete genome5e-54220BLASTN svgBLASTP svg
NC_020260:88230788230791401031704Cronobacter sakazakii Sp291, complete genome1e-39172BLASTN svgBLASTP svg
NC_014121:37769023776902380024423343Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, complete1e-39172BLASTN svgBLASTP svg
NC_013961:441719*44171947879337075Erwinia amylovora, complete genome6e-38167BLASTN svgBLASTP svg
NC_011083:45478254547825460814560321Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,1e-29139BLASTN svgBLASTP svg
NC_008563:47078264707826473072322898Escherichia coli APEC O1, complete genome3e-27131BLASTN svgBLASTP svg
NC_011750:47757704775770480021124442Escherichia coli IAI39 chromosome, complete genome3e-27131BLASTN svgBLASTP svg
NC_004431:43191524319152434223723086Escherichia coli CFT073, complete genome8e-25123BLASTN svgBLASTP svg
CP002516:42366804236680425575819079Escherichia coli KO11, complete genome3e-24121BLASTN svgBLASTP svg
NC_015663:113797137971Enterobacter aerogenes KCTC 2190 chromosome, complete genome2e-22115BLASTN svgBLASTP svg
NC_008253:31613113161311320913747827Escherichia coli 536, complete genome7e-19103BLASTN svgBLASTP svg
NC_013850:4829455*4829455485950430050Klebsiella variicola At-22 chromosome, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_007712:3629358*3629358365546826111Sodalis glossinidius str. 'morsitans', complete genome2e-1385.7BLASTN svgBLASTP svg
NC_010634:13423931342393136733024938Yersinia pseudotuberculosis PB1/+, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_012912:10536181053618108982736210Dickeya zeae Ech1591, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_013592:446092*44609246819222101Dickeya dadantii Ech586, complete genome7e-1383.8BLASTN svgBLASTP svg
CP002516:44744*447447499130248Escherichia coli KO11, complete genome7e-1383.8BLASTN svgBLASTP svg
CP002185:4035502*4035502406409928598Escherichia coli W, complete genome7e-1383.8BLASTN svgBLASTP svg
NC_012917:32411963241196329451553320Pectobacterium carotovorum subsp. carotovorum PC1, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_004431:1211000*1211000123322222223Escherichia coli CFT073, complete genome3e-1281.8BLASTN svgBLASTP svg
AC_000091:2747520*2747520280214854629Escherichia coli W3110 DNA, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_000913:2746886*2746886280151454629Escherichia coli K12, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_010473:2839902*2839902288978149880Escherichia coli str. K-12 substr. DH10B, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_010694:436500*43650046233725838Erwinia tasmaniensis, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_015663:1356982*1356982138951032529Enterobacter aerogenes KCTC 2190 chromosome, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_010159:12880001288000132559537596Yersinia pestis Angola, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_008150:43737224373722439711823397Yersinia pestis Antiqua, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_008149:31886031886034352424665Yersinia pestis Nepal516, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_005810:43067164306716433058723872Yersinia pestis biovar Microtus str. 91001, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_004088:4202247*4202247422568123435Yersinia pestis KIM, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_003143:39874839874842431625569Yersinia pestis CO92, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_004337:3049118*3049118311609966982Shigella flexneri 2a str. 301, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_004741:3041294*3041294310468963396Shigella flexneri 2a str. 2457T, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_013716:5201097*5201097527659975503Citrobacter rodentium ICC168, complete genome7e-1073.8BLASTN svgBLASTP svg
AP010958:36695003669500372827458775Escherichia coli O103:H2 str. 12009 DNA, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_007946:1119000*1119000114261923620Escherichia coli UTI89, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_004431:3409389*3409389349493685548Escherichia coli CFT073, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_011750:43900004390000444275952760Escherichia coli IAI39 chromosome, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_013716:3512950*3512950355955346604Citrobacter rodentium ICC168, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_014541:3642241*3642241367858636346Ferrimonas balearica DSM 9799 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_013592:32630053263005329243329429Dickeya dadantii Ech586, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_005085:1269787*1269787132843458648Chromobacterium violaceum ATCC 12472, complete genome2e-0765.9BLASTN svgBLASTP svg