Query: NC_013315:435599 Clostridium difficile CD196 chromosome, complete genome
Start: 435599, End: 458682, Length: 23084
Host Lineage: Peptoclostridium difficile; Peptoclostridium; Peptostreptococcaceae; Clostridiales; Firmicutes; Bacteria
General Information: Isolated from a single patient with pseudomembranous colitis in a Paris hospital in 1985. Clostridium difficile, a Gram-positive, spore-forming anaerobic bacterium, is the leading cause of infectious diarrhea among patients in hospitals worldwide, causing C. difficile infection (CDI). An important nosocomial pathogen, it is frequently associated with antibiotic treatment and causes diseases ranging from antibiotic-associated diarrhea to life-threatening pseudomembraneous colitis.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
| Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
|---|
| NC_009089:428075 | 428075 | 466356 | 38282 | Clostridium difficile 630, complete genome | 0 | 4153 | BLASTN svg | BLASTP svg |
| NC_009089:478328* | 478328 | 516637 | 38310 | Clostridium difficile 630, complete genome | 0 | 3556 | BLASTN svg | BLASTP svg |
| NC_013316:4095905 | 4095905 | 4129996 | 34092 | Clostridium difficile R20291, complete genome | 0 | 1705 | BLASTN svg | BLASTP svg |
| NC_012563:2466000 | 2466000 | 2488529 | 22530 | Clostridium botulinum A2 str. Kyoto, complete genome | 1e-140 | 507 | BLASTN svg | BLASTP svg |
| NC_010516:2374000 | 2374000 | 2396814 | 22815 | Clostridium botulinum B1 str. Okra, complete genome | 1e-140 | 507 | BLASTN svg | BLASTP svg |
| NC_012563:3729817 | 3729817 | 3766590 | 36774 | Clostridium botulinum A2 str. Kyoto, complete genome | 9e-31 | 143 | BLASTN svg | BLASTP svg |
| NC_009089:965959 | 965959 | 988337 | 22379 | Clostridium difficile 630, complete genome | 2e-28 | 135 | BLASTN svg | BLASTP svg |
| NC_010516:3545017 | 3545017 | 3568099 | 23083 | Clostridium botulinum B1 str. Okra, complete genome | 2e-28 | 135 | BLASTN svg | BLASTP svg |
| NC_013316:891782 | 891782 | 914347 | 22566 | Clostridium difficile R20291, complete genome | 5e-26 | 127 | BLASTN svg | BLASTP svg |
| NC_009089:3782000 | 3782000 | 3804099 | 22100 | Clostridium difficile 630, complete genome | 3e-21 | 111 | BLASTN svg | BLASTP svg |
| NC_010723:371741 | 371741 | 393522 | 21782 | Clostridium botulinum E3 str. Alaska E43, complete genome | 2e-16 | 95.6 | BLASTN svg | BLASTP svg |
| NC_004557:2552418 | 2552418 | 2574319 | 21902 | Clostridium tetani E88, complete genome | 1e-14 | 89.7 | BLASTN svg | BLASTP svg |
| NC_020291:491000 | 491000 | 511064 | 20065 | Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genome | 5e-14 | 87.7 | BLASTN svg | BLASTP svg |
| NC_010674:370629 | 370629 | 398107 | 27479 | Clostridium botulinum B str. Eklund 17B, complete genome | 5e-14 | 87.7 | BLASTN svg | BLASTP svg |
| NC_014393:3650957 | 3650957 | 3669642 | 18686 | Clostridium cellulovorans 743B chromosome, complete genome | 2e-13 | 85.7 | BLASTN svg | BLASTP svg |
| NC_008262:2498000 | 2498000 | 2521442 | 23443 | Clostridium perfringens SM101, complete genome | 7e-13 | 83.8 | BLASTN svg | BLASTP svg |
| NC_008593:1513107 | 1513107 | 1536824 | 23718 | Clostridium novyi NT, complete genome | 3e-12 | 81.8 | BLASTN svg | BLASTP svg |
| NC_010516:3466000 | 3466000 | 3488099 | 22100 | Clostridium botulinum B1 str. Okra, complete genome | 5e-11 | 77.8 | BLASTN svg | BLASTP svg |
| NC_003454:822804 | 822804 | 841099 | 18296 | Fusobacterium nucleatum subsp. nucleatum ATCC 25586, complete | 5e-11 | 77.8 | BLASTN svg | BLASTP svg |
| NC_020291:2291418 | 2291418 | 2314300 | 22883 | Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genome | 2e-10 | 75.8 | BLASTN svg | BLASTP svg |
| NC_021182:1473535 | 1473535 | 1496599 | 23065 | Clostridium pasteurianum BC1, complete genome | 7e-10 | 73.8 | BLASTN svg | BLASTP svg |
| NC_012225:2523262 | 2523262 | 2547580 | 24319 | Brachyspira hyodysenteriae WA1, complete genome | 7e-10 | 73.8 | BLASTN svg | BLASTP svg |
| NC_018607:2111581 | 2111581 | 2145322 | 33742 | Brachyspira pilosicoli B2904 chromosome, complete genome | 1e-08 | 69.9 | BLASTN svg | BLASTP svg |
| NC_008262:2433979* | 2433979 | 2468482 | 34504 | Clostridium perfringens SM101, complete genome | 4e-08 | 67.9 | BLASTN svg | BLASTP svg |
| NC_008262:784878* | 784878 | 829910 | 45033 | Clostridium perfringens SM101, complete genome | 4e-08 | 67.9 | BLASTN svg | BLASTP svg |
| NC_014330:768232 | 768232 | 813099 | 44868 | Brachyspira pilosicoli 95/1000 chromosome, complete genome | 4e-08 | 67.9 | BLASTN svg | BLASTP svg |
| NC_019908:2401577 | 2401577 | 2446177 | 44601 | Brachyspira pilosicoli P43/6/78 chromosome, complete genome | 4e-08 | 67.9 | BLASTN svg | BLASTP svg |
| NC_018604:2579000* | 2579000 | 2633637 | 54638 | Brachyspira pilosicoli WesB complete genome | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
| NC_014328:2643588 | 2643588 | 2667210 | 23623 | Clostridium ljungdahlii ATCC 49587 chromosome, complete genome | 7e-07 | 63.9 | BLASTN svg | BLASTP svg |
| NC_010718:1959517* | 1959517 | 1982986 | 23470 | Natranaerobius thermophilus JW/NM-WN-LF, complete genome | 7e-07 | 63.9 | BLASTN svg | BLASTP svg |
| NC_003869:1643682* | 1643682 | 1672302 | 28621 | Thermoanaerobacter tengcongensis MB4, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |