Pre_GI: BLASTN Hits

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Query: NC_012660:5121219 Pseudomonas fluorescens SBW25 chromosome, complete genome

Start: 5121219, End: 5145627, Length: 24409

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Isolated in 1989 from the leaf surface of a sugar beet plant grown at the University Farm, Wytham, Oxford, UK. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_004129:2034500*2034500206459930100Pseudomonas fluorescens Pf-5, complete genome01713BLASTN svgBLASTP svg
NC_020209:32620003262000328797525976Pseudomonas poae RE*1-1-14, complete genome0686BLASTN svgBLASTP svg
NC_007005:2149275*2149275217042621152Pseudomonas syringae pv. syringae B728a, complete genome5e-45190BLASTN svgBLASTP svg
NC_015410:2838132*2838132286405125920Pseudomonas mendocina NK-01 chromosome, complete genome4e-36161BLASTN svgBLASTP svg
NC_009439:2337024*2337024236235425331Pseudomonas mendocina ymp, complete genome2e-32149BLASTN svgBLASTP svg
NC_013501:1691532*1691532171518723656Rhodothermus marinus DSM 4252, complete genome1e-23119BLASTN svgBLASTP svg
NC_013592:1730505*1730505176316532661Dickeya dadantii Ech586, complete genome1e-20109BLASTN svgBLASTP svg
NC_012912:1788308*1788308184662758320Dickeya zeae Ech1591, complete genome1e-20109BLASTN svgBLASTP svg
NC_005773:4028500*4028500405209923600Pseudomonas syringae pv. phaseolicola 1448A, complete genome5e-20107BLASTN svgBLASTP svg
NC_005773:32205003220500325277732278Pseudomonas syringae pv. phaseolicola 1448A, complete genome2e-19105BLASTN svgBLASTP svg
NC_005773:4282840*4282840431412131282Pseudomonas syringae pv. phaseolicola 1448A, complete genome8e-19103BLASTN svgBLASTP svg
NC_014500:3023762*3023762306170037939Dickeya dadantii 3937 chromosome, complete genome3e-18101BLASTN svgBLASTP svg
NC_013456:2528284*2528284254628518002Vibrio sp. Ex25 chromosome 1, complete genome1e-1799.6BLASTN svgBLASTP svg
NC_004603:1115134*1115134114139026257Vibrio parahaemolyticus RIMD 2210633 chromosome I, complete1e-1799.6BLASTN svgBLASTP svg
NC_020209:5077410*5077410511615938750Pseudomonas poae RE*1-1-14, complete genome5e-1797.6BLASTN svgBLASTP svg
NC_002505:1892430*1892430192509932670Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, complete5e-1797.6BLASTN svgBLASTP svg
NC_004088:2491303*2491303251808626784Yersinia pestis KIM, complete genome5e-1487.7BLASTN svgBLASTP svg
NC_009778:2227627*2227627228586658240Enterobacter sakazakii ATCC BAA-894, complete genome5e-1487.7BLASTN svgBLASTP svg
NC_010465:2383219*2383219240542422206Yersinia pseudotuberculosis YPIII, complete genome5e-1487.7BLASTN svgBLASTP svg
NC_015703:3842144*3842144386963427491Runella slithyformis DSM 19594 chromosome, complete genome5e-1487.7BLASTN svgBLASTP svg
NC_004547:1970686*1970686199651325828Erwinia carotovora subsp. atroseptica SCRI1043, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_008570:1986466*1986466201051824053Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_009348:2631759*2631759265138819630Aeromonas salmonicida subsp. salmonicida A449, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_012691:2097287*2097287211808120795Tolumonas auensis DSM 9187, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_012917:2921932*2921932295050128570Pectobacterium carotovorum subsp. carotovorum PC1, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_013421:3117639*3117639314038322745Pectobacterium wasabiae WPP163, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_012660:1579204*1579204162109241889Pseudomonas fluorescens SBW25 chromosome, complete genome8e-1383.8BLASTN svgBLASTP svg
NC_007946:1119000*1119000114261923620Escherichia coli UTI89, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_006905:1186895*1186895121502828134Salmonella enterica subsp. enterica serovar Choleraesuis str3e-1281.8BLASTN svgBLASTP svg
NC_006511:1770000*1770000179181621817Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC3e-1281.8BLASTN svgBLASTP svg
NC_004631:1842050*1842050186312621077Salmonella enterica subsp. enterica serovar Typhi Ty2, complete3e-1281.8BLASTN svgBLASTP svg
NC_004337:1065609*1065609109071125103Shigella flexneri 2a str. 301, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_003198:1117687*1117687114274925063Salmonella enterica subsp. enterica serovar Typhi str. CT18,3e-1281.8BLASTN svgBLASTP svg
NC_003197:12075971207597123259925003Salmonella typhimurium LT2, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_002947:49943354994335504935655022Pseudomonas putida KT2440, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_000913:1087062*1087062110699919938Escherichia coli K12, complete genome3e-1281.8BLASTN svgBLASTP svg
AC_000091:1083798*1083798110686123064Escherichia coli W3110 DNA, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_008027:4953432*4953432497941825987Pseudomonas entomophila L48, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_008258:1076922*1076922110024923328Shigella flexneri 5 str. 8401, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_015968:1709680*1709680173221922540Enterobacter asburiae LF7a chromosome, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_015663:3466471*3466471350514038670Enterobacter aerogenes KCTC 2190 chromosome, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_014121:2629075*2629075265233623262Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, complete3e-1281.8BLASTN svgBLASTP svg
NC_013716:1178383*1178383120516726785Citrobacter rodentium ICC168, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_011149:1987291*1987291203423646946Salmonella enterica subsp. enterica serovar Agona str. SL483,3e-1281.8BLASTN svgBLASTP svg
NC_011083:12165001216500123593619437Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,3e-1281.8BLASTN svgBLASTP svg
NC_011080:12099351209935123471124777Salmonella enterica subsp. enterica serovar Newport str. SL254,3e-1281.8BLASTN svgBLASTP svg
NC_010468:2809125*2809125282748818364Escherichia coli ATCC 8739, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_010102:1979742*1979742200183422093Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,3e-1281.8BLASTN svgBLASTP svg
NC_010067:1782998*1782998180098317986Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, complete3e-1281.8BLASTN svgBLASTP svg
NC_009512:469000*46900049317124172Pseudomonas putida F1, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_012660:37448683744868377123626369Pseudomonas fluorescens SBW25 chromosome, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_012560:32009613200961322539624436Azotobacter vinelandii DJ, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_021150:32009593200959322539424436Azotobacter vinelandii CA6, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_014168:2575799*2575799261011334315Segniliparus rotundus DSM 44985 chromosome, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_008577:2115440*2115440215134235903Shewanella sp. ANA-3 chromosome 1, complete sequence5e-0867.9BLASTN svgBLASTP svg
NC_008322:2077628*2077628211677239145Shewanella sp. MR-7, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_008321:1993541*1993541201934825808Shewanella sp. MR-4, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_021177:21398382139838216484225005Streptomyces fulvissimus DSM 40593, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_007508:1221500*1221500126063139132Xanthomonas campestris pv. vesicatoria str. 85-10, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_008726:92589592589594809922205Mycobacterium vanbaalenii PYR-1, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_009512:15181131518113155588037768Pseudomonas putida F1, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_016010:1169850*1169850119450124652Xanthomonas axonopodis pv. citrumelo F1 chromosome, complete7e-0763.9BLASTN svgBLASTP svg
NC_014366:1435785*1435785146660130817Gamma proteobacterium HdN1, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_010515:12052581205258122726722010Burkholderia cenocepacia MC0-3 chromosome 2, complete sequence3e-0661.9BLASTN svgBLASTP svg
NC_007005:98488*9848813693138444Pseudomonas syringae pv. syringae B728a, complete genome3e-0661.9BLASTN svgBLASTP svg