Pre_GI: BLASTN Hits

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Query: NC_011751:3984236 Escherichia coli UMN026 chromosome, complete genome

Start: 3984236, End: 4008416, Length: 24181

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Isolated from a woman with uncomplicated acute cystitis in 1999 in the USA. This strain is drug resistant. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_004431:39864723986472400948723016Escherichia coli CFT073, complete genome017300BLASTN svgBLASTP svg
NC_008253:36663873666387368940123015Escherichia coli 536, complete genome017290BLASTN svgBLASTP svg
NC_008563:38438593843859386844824590Escherichia coli APEC O1, complete genome017280BLASTN svgBLASTP svg
NC_007946:38110823811082383566424583Escherichia coli UTI89, complete genome017260BLASTN svgBLASTP svg
NC_011740:34534553453455348056527111Escherichia fergusonii ATCC 35469, complete genome010790BLASTN svgBLASTP svg
NC_010658:36226103622610364133018721Shigella boydii CDC 3083-94, complete genome04341BLASTN svgBLASTP svg
NC_015968:43898714389871441516025290Enterobacter asburiae LF7a chromosome, complete genome02099BLASTN svgBLASTP svg
NC_012214:37506493750649377787527227Erwinia pyrifoliae Ep1/96, complete genome5e-85323BLASTN svgBLASTP svg
NC_012912:24270924270927148728779Dickeya zeae Ech1591, complete genome4e-79303BLASTN svgBLASTP svg
NC_012779:3570720*3570720359409923380Edwardsiella ictaluri 93-146, complete genome6e-32147BLASTN svgBLASTP svg
AC_000091:39952333995233402122325991Escherichia coli W3110 DNA, complete genome9e-22113BLASTN svgBLASTP svg
NC_000913:3624826*3624826366560340778Escherichia coli K12, complete genome9e-22113BLASTN svgBLASTP svg
NC_007384:38970003897000391653419535Shigella sonnei Ss046, complete genome9e-22113BLASTN svgBLASTP svg
NC_007613:34703143470314350909338780Shigella boydii Sb227, complete genome9e-22113BLASTN svgBLASTP svg
NC_010473:37225713722571375929536725Escherichia coli str. K-12 substr. DH10B, complete genome9e-22113BLASTN svgBLASTP svg
NC_015424:23162282316228235664140414Aeromonas veronii B565 chromosome, complete genome5e-20107BLASTN svgBLASTP svg
AC_000091:3258377*3258377328148023104Escherichia coli W3110 DNA, complete genome5e-1797.6BLASTN svgBLASTP svg
CP002185:3475991*3475991350005224062Escherichia coli W, complete genome5e-1797.6BLASTN svgBLASTP svg
CP002516:613462*61346263169018229Escherichia coli KO11, complete genome5e-1797.6BLASTN svgBLASTP svg
CU928160:3344746*3344746336309918354Escherichia coli IAI1 chromosome, complete genome5e-1797.6BLASTN svgBLASTP svg
NC_000913:3256307*3256307327821621910Escherichia coli K12, complete genome5e-1797.6BLASTN svgBLASTP svg
NC_004337:3590323*35903233952993362671Shigella flexneri 2a str. 301, complete genome5e-1797.6BLASTN svgBLASTP svg
NC_007613:29818292981829300438522557Shigella boydii Sb227, complete genome5e-1797.6BLASTN svgBLASTP svg
NC_009800:3307123*3307123332547318351Escherichia coli HS, complete genome5e-1797.6BLASTN svgBLASTP svg
NC_009801:35950013595001361359918599Escherichia coli E24377A, complete genome5e-1797.6BLASTN svgBLASTP svg
NC_010468:61381261381263388120070Escherichia coli ATCC 8739, complete genome5e-1797.6BLASTN svgBLASTP svg
NC_010473:3354052*3354052337759923548Escherichia coli str. K-12 substr. DH10B, complete genome5e-1797.6BLASTN svgBLASTP svg
NC_004337:32497913249791327283723047Shigella flexneri 2a str. 301, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_004741:3240909*3240909326236621458Shigella flexneri 2a str. 2457T, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_008258:32247213224721324719422474Shigella flexneri 5 str. 8401, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_010658:3014371*3014371303259918229Shigella boydii CDC 3083-94, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_010473:4564590*4564590458823123642Escherichia coli str. K-12 substr. DH10B, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_000913:4462782*4462782448642323642Escherichia coli K12, complete genome5e-1177.8BLASTN svgBLASTP svg
AC_000091:4472000*4472000449474322744Escherichia coli W3110 DNA, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_010498:4821519*4821519484497023452Escherichia coli SMS-3-5, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_007613:4217557*4217557425611838562Shigella boydii Sb227, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_007626:2283793*2283793230659922807Magnetospirillum magneticum AMB-1, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_010658:4494103*4494103451209917997Shigella boydii CDC 3083-94, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_013851:1866523*1866523188892822406Allochromatium vinosum DSM 180 chromosome, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_007492:2203220*2203220222417320954Pseudomonas fluorescens PfO-1, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_008258:1934479*1934479196306928591Shigella flexneri 5 str. 8401, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_010688:14916114916117820129041Xanthomonas campestris pv. campestris, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_013854:33054333054335359923057Azospirillum sp. B510, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_011420:2803196*2803196282514221947Rhodospirillum centenum SW, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_020063:3690308*3690308375363663329Enterobacteriaceae bacterium strain FGI 57, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_015460:1687684*1687684170876521082Gallibacterium anatis UMN179 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_011748:3608917*3608917363276823852Escherichia coli 55989, complete genome3e-0661.9BLASTN svgBLASTP svg
CU928145:3608917*3608917363276823852Escherichia coli 55989 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg