Pre_GI: BLASTN Hits

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Query: NC_009092:1305355 Shewanella loihica PV-4, complete genome

Start: 1305355, End: 1328936, Length: 23582

Host Lineage: Shewanella loihica; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain is an environmental isolate from the Naha Vents, Hawaii, in the Pacific Ocean. Psychrotolerant bacterium. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. Shewanella loihica is a psychrotolerant deep sea bacterium. This organism is able to reduce iron, manganese and uranium and may be useful for bioremediation at low temperatures.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_009092:26441642644164266929125128Shewanella loihica PV-4, complete genome02797BLASTN svgBLASTP svg
NC_009092:1047500*1047500107272925230Shewanella loihica PV-4, complete genome02716BLASTN svgBLASTP svg
NC_009092:36824133682413370194319531Shewanella loihica PV-4, complete genome6e-26127BLASTN svgBLASTP svg
NC_009092:32395003239500326129021791Shewanella loihica PV-4, complete genome2e-19105BLASTN svgBLASTP svg
NC_007645:51601335160133519409633964Hahella chejuensis KCTC 2396, complete genome1e-1799.6BLASTN svgBLASTP svg
NC_009092:37830003783000380209919100Shewanella loihica PV-4, complete genome8e-1693.7BLASTN svgBLASTP svg
NC_012779:261438*26143828632424887Edwardsiella ictaluri 93-146, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_009092:25295182529518255250622989Shewanella loihica PV-4, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_009092:19352811935281195928524005Shewanella loihica PV-4, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_009092:26177826177828459922822Shewanella loihica PV-4, complete genome5e-1487.7BLASTN svgBLASTP svg
NC_009997:26350252635025266689331869Shewanella baltica OS195, complete genome5e-1487.7BLASTN svgBLASTP svg
NC_009092:3057319*3057319308409726779Shewanella loihica PV-4, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_018868:40106154010615403309922485Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_008344:24650422465042248871223671Nitrosomonas eutropha C91, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_003143:1033500*1033500105953426035Yersinia pestis CO92, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_004088:3661601*3661601368761226012Yersinia pestis KIM, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_005810:3964468*3964468399026325796Yersinia pestis biovar Microtus str. 91001, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_006155:3779381*3779381380559426214Yersinia pseudotuberculosis IP 32953, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_008149:35294283529428355543826011Yersinia pestis Nepal516, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_008150:36122436122439094629723Yersinia pestis Antiqua, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_010159:138879*13887916617427296Yersinia pestis Angola, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_010465:933488*93348895909925612Yersinia pseudotuberculosis YPIII, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_010634:3692321*3692321371595823638Yersinia pseudotuberculosis PB1/+, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_009092:15043631504363158010375741Shewanella loihica PV-4, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_005773:4028500*4028500405209923600Pseudomonas syringae pv. phaseolicola 1448A, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_008321:32320003232000325409922100Shewanella sp. MR-4, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_008789:350650*35065039417443525Halorhodospira halophila SL1, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_009092:37323903732390375553223143Shewanella loihica PV-4, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_007404:11267561126756114893922184Thiobacillus denitrificans ATCC 25259, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_004757:1021355*1021355105233830984Nitrosomonas europaea ATCC 19718, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_013173:12312131231213125559024378Desulfomicrobium baculatum DSM 4028, complete genome3e-0661.9BLASTN svgBLASTP svg