Query: NC_009092:1305355 Shewanella loihica PV-4, complete genome
Start: 1305355, End: 1328936, Length: 23582
Host Lineage: Shewanella loihica; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria
General Information: This strain is an environmental isolate from the Naha Vents, Hawaii, in the Pacific Ocean. Psychrotolerant bacterium. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. Shewanella loihica is a psychrotolerant deep sea bacterium. This organism is able to reduce iron, manganese and uranium and may be useful for bioremediation at low temperatures.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
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NC_009092:2644164 | 2644164 | 2669291 | 25128 | Shewanella loihica PV-4, complete genome | 0 | 2797 | BLASTN svg | BLASTP svg |
NC_009092:1047500* | 1047500 | 1072729 | 25230 | Shewanella loihica PV-4, complete genome | 0 | 2716 | BLASTN svg | BLASTP svg |
NC_009092:3682413 | 3682413 | 3701943 | 19531 | Shewanella loihica PV-4, complete genome | 6e-26 | 127 | BLASTN svg | BLASTP svg |
NC_009092:3239500 | 3239500 | 3261290 | 21791 | Shewanella loihica PV-4, complete genome | 2e-19 | 105 | BLASTN svg | BLASTP svg |
NC_007645:5160133 | 5160133 | 5194096 | 33964 | Hahella chejuensis KCTC 2396, complete genome | 1e-17 | 99.6 | BLASTN svg | BLASTP svg |
NC_009092:3783000 | 3783000 | 3802099 | 19100 | Shewanella loihica PV-4, complete genome | 8e-16 | 93.7 | BLASTN svg | BLASTP svg |
NC_012779:261438* | 261438 | 286324 | 24887 | Edwardsiella ictaluri 93-146, complete genome | 3e-15 | 91.7 | BLASTN svg | BLASTP svg |
NC_009092:2529518 | 2529518 | 2552506 | 22989 | Shewanella loihica PV-4, complete genome | 1e-14 | 89.7 | BLASTN svg | BLASTP svg |
NC_009092:1935281 | 1935281 | 1959285 | 24005 | Shewanella loihica PV-4, complete genome | 1e-14 | 89.7 | BLASTN svg | BLASTP svg |
NC_009092:261778 | 261778 | 284599 | 22822 | Shewanella loihica PV-4, complete genome | 5e-14 | 87.7 | BLASTN svg | BLASTP svg |
NC_009997:2635025 | 2635025 | 2666893 | 31869 | Shewanella baltica OS195, complete genome | 5e-14 | 87.7 | BLASTN svg | BLASTP svg |
NC_009092:3057319* | 3057319 | 3084097 | 26779 | Shewanella loihica PV-4, complete genome | 5e-11 | 77.8 | BLASTN svg | BLASTP svg |
NC_018868:4010615 | 4010615 | 4033099 | 22485 | Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genome | 2e-10 | 75.8 | BLASTN svg | BLASTP svg |
NC_008344:2465042 | 2465042 | 2488712 | 23671 | Nitrosomonas eutropha C91, complete genome | 2e-10 | 75.8 | BLASTN svg | BLASTP svg |
NC_003143:1033500* | 1033500 | 1059534 | 26035 | Yersinia pestis CO92, complete genome | 3e-09 | 71.9 | BLASTN svg | BLASTP svg |
NC_004088:3661601* | 3661601 | 3687612 | 26012 | Yersinia pestis KIM, complete genome | 3e-09 | 71.9 | BLASTN svg | BLASTP svg |
NC_005810:3964468* | 3964468 | 3990263 | 25796 | Yersinia pestis biovar Microtus str. 91001, complete genome | 3e-09 | 71.9 | BLASTN svg | BLASTP svg |
NC_006155:3779381* | 3779381 | 3805594 | 26214 | Yersinia pseudotuberculosis IP 32953, complete genome | 3e-09 | 71.9 | BLASTN svg | BLASTP svg |
NC_008149:3529428 | 3529428 | 3555438 | 26011 | Yersinia pestis Nepal516, complete genome | 3e-09 | 71.9 | BLASTN svg | BLASTP svg |
NC_008150:361224 | 361224 | 390946 | 29723 | Yersinia pestis Antiqua, complete genome | 3e-09 | 71.9 | BLASTN svg | BLASTP svg |
NC_010159:138879* | 138879 | 166174 | 27296 | Yersinia pestis Angola, complete genome | 3e-09 | 71.9 | BLASTN svg | BLASTP svg |
NC_010465:933488* | 933488 | 959099 | 25612 | Yersinia pseudotuberculosis YPIII, complete genome | 3e-09 | 71.9 | BLASTN svg | BLASTP svg |
NC_010634:3692321* | 3692321 | 3715958 | 23638 | Yersinia pseudotuberculosis PB1/+, complete genome | 3e-09 | 71.9 | BLASTN svg | BLASTP svg |
NC_009092:1504363 | 1504363 | 1580103 | 75741 | Shewanella loihica PV-4, complete genome | 4e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_005773:4028500* | 4028500 | 4052099 | 23600 | Pseudomonas syringae pv. phaseolicola 1448A, complete genome | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
NC_008321:3232000 | 3232000 | 3254099 | 22100 | Shewanella sp. MR-4, complete genome | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
NC_008789:350650* | 350650 | 394174 | 43525 | Halorhodospira halophila SL1, complete genome | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
NC_009092:3732390 | 3732390 | 3755532 | 23143 | Shewanella loihica PV-4, complete genome | 7e-07 | 63.9 | BLASTN svg | BLASTP svg |
NC_007404:1126756 | 1126756 | 1148939 | 22184 | Thiobacillus denitrificans ATCC 25259, complete genome | 7e-07 | 63.9 | BLASTN svg | BLASTP svg |
NC_004757:1021355* | 1021355 | 1052338 | 30984 | Nitrosomonas europaea ATCC 19718, complete genome | 7e-07 | 63.9 | BLASTN svg | BLASTP svg |
NC_013173:1231213 | 1231213 | 1255590 | 24378 | Desulfomicrobium baculatum DSM 4028, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |