Pre_GI Gene

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Host: NC_009092 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_009092:3783000 Shewanella loihica PV-4, complete genome

Host Lineage: Shewanella loihica; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain is an environmental isolate from the Naha Vents, Hawaii, in the Pacific Ocean. Psychrotolerant bacterium. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. Shewanella loihica is a psychrotolerant deep sea bacterium. This organism is able to reduce iron, manganese and uranium and may be useful for bioremediation at low temperatures.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
378325737845881332NaH antiporter NhaCQuickGO ontologyBLASTP
37847443785520777hypothetical protein
37855293786245717pseudouridine synthaseQuickGO ontologyBLASTP
378679837884651668fumarate reductasesuccinate dehydrogenase flavoprotein domain proteinQuickGO ontologyBLASTP
37885323788888357hypothetical proteinBLASTP
37892523789635384hypothetical protein
37903543790872519hypothetical proteinBLASTP
37914173792193777hypothetical proteinBLASTP
379225437932551002transcriptional regulator AraC familyQuickGO ontologyBLASTP
379377737959332157hypothetical proteinBLASTP
379615737973441188aromatic amino acid permeaseQuickGO ontologyBLASTP
37979743798528555protein of unknown function UPF0016QuickGO ontologyBLASTP
379865638001161461CatalaseQuickGO ontologyBLASTP
38008283801079252hypothetical proteinBLASTP
38012343801683450uncharacterized domain 1 proteinQuickGO ontologyBLASTP