Pre_GI: BLASTP Hits

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Query: NC_009092:3783000:3786798 Shewanella loihica PV-4, complete genome

Start: 3786798, End: 3788465, Length: 1668

Host Lineage: Shewanella loihica; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain is an environmental isolate from the Naha Vents, Hawaii, in the Pacific Ocean. Psychrotolerant bacterium. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. Shewanella loihica is a psychrotolerant deep sea bacterium. This organism is able to reduce iron, manganese and uranium and may be useful for bioremediation at low temperatures.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013204:2955500:2964079296407929657461668Eggerthella lenta DSM 2243, complete genomefumarate reductase/succinate dehydrogenase flavoprotein domain protein6e-84311
NC_014152:241776:2514472514472531591713Thermincola sp. JR, complete genomefumarate reductase/succinate dehydrogenase flavoprotein domain protein3e-54213
NC_015738:2773552:2786784278678427885411758Eggerthella sp. YY7918, complete genomehypothetical protein3e-42173
NC_014220:1732254:1743412174341217451151704Syntrophothermus lipocalidus DSM 12680 chromosome, complete genomeSuccinate dehydrogenase5e-39162
NC_015738:629297:6345956345956362651671Eggerthella sp. YY7918, complete genomesuccinate dehydrogenase1e-37158
NC_011830:633195:6342336342336362061974Desulfitobacterium hafniense DCB-2, complete genomeFMN-binding domain protein7e-36152
NC_011830:1190502:1193582119358211953781797Desulfitobacterium hafniense DCB-2, complete genomefumarate reductase/succinate dehydrogenase flavoprotein domain protein5e-36152
NC_015738:1707173:1731234173123417329821749Eggerthella sp. YY7918, complete genomehypothetical protein1e-33144
NC_013204:799857:7998577998578015451689Eggerthella lenta DSM 2243, complete genomefumarate reductase/succinate dehydrogenase flavoprotein domain protein3e-32140
NC_015738:629297:6309666309666327111746Eggerthella sp. YY7918, complete genomehypothetical protein1e-28128
NC_014328:938393:9563509563509578101461Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative reductase flavoprotein subunit7e-27122
NC_013204:799857:8028138028138046121800Eggerthella lenta DSM 2243, complete genomefumarate reductase/succinate dehydrogenase flavoprotein domain protein2e-23110
NC_014727:95875:9771797717996001884Lactobacillus delbrueckii subsp. bulgaricus ND02 chromosome,fumarate reductase flavoprotein subunit2e-21104
NC_008054:930890:9370839370839385521470Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842, completePutative fumarate reductase (flavoprotein)1e-20101
NC_008054:930890:9468849468849483531470Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842, completePutative fumarate reductase (flavoprotein)1e-20101
NC_005362:52848:7154871548733981851Lactobacillus johnsonii NCC 533, complete genomehypothetical protein2e-1997.8
NC_009633:3522933:3533262353326235350701809Alkaliphilus metalliredigens QYMF chromosome, complete genomeflavocytochrome c3e-1997.1
NC_014727:995480:1014770101477010161641395Lactobacillus delbrueckii subsp. bulgaricus ND02 chromosome,fumarate reductase, flavoprotein subunit8e-1995.5
NC_011830:4187362:4202017420201742037501734Desulfitobacterium hafniense DCB-2, complete genomefumarate reductase/succinate dehydrogenase flavoprotein domain protein3e-1894
NC_013204:2955500:2958608295860829602901683Eggerthella lenta DSM 2243, complete genomefumarate reductase/succinate dehydrogenase flavoprotein domain protein3e-1894
NC_013165:2700978:2702900270290027046211722Slackia heliotrinireducens DSM 20476, complete genomesuccinate dehydrogenase/fumarate reductase flavoprotein subunit1e-1792
NC_003454:677699:6871836871836888591677Fusobacterium nucleatum subsp. nucleatum ATCC 25586, completeFumarate reductase flavoprotein subunit5e-1789.7
NC_009633:365325:3653253653253672591935Alkaliphilus metalliredigens QYMF chromosome, complete genomeflavocytochrome c7e-1789.4
NC_015957:5082172:5102091510209151038121722Streptomyces violaceusniger Tu 4113 chromosome, complete genomefumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein1e-1688.2
NC_020126:6190662:6190662619066261923171656Myxococcus stipitatus DSM 14675, complete genomefumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein3e-1687.4
NC_015732:2735753:2737027273702727387661740Spirochaeta caldaria DSM 7334 chromosome, complete genomeflavocytochrome c5e-1686.7
NC_010512:951527:9746489746489763571710Burkholderia cenocepacia MC0-3 chromosome 3, complete sequencefumarate reductase/succinate dehydrogenase flavoprotein domain protein8e-1685.9
NC_008529:906576:925112925112925954843Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365, complete1e-1585.5
NC_008529:887008:933464933464934306843Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365, complete1e-1585.5
NC_008529:918277:933464933464934306843Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365, complete1e-1585.5
NC_008529:887008:925112925112925954843Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365, complete1e-1585.5
NC_008529:906576:933464933464934306843Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365, complete1e-1585.5
NC_008529:918277:925112925112925954843Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365, complete1e-1585.5
NC_014328:3336000:3340834334083433436142781Clostridium ljungdahlii ATCC 49587 chromosome, complete genomefumarate reductase/succinate dehydrogenase flavoprotein-like protein1e-1585.5
NC_013165:329185:3826453826453844291785Slackia heliotrinireducens DSM 20476, complete genomesuccinate dehydrogenase/fumarate reductase flavoprotein subunit2e-1584.3
NC_009092:3682413:3693260369326036950501791Shewanella loihica PV-4, complete genomeflavocytochrome c3e-1584
NC_007974:2048000:2090060209006020917631704Ralstonia metallidurans CH34 chromosome 2, complete sequencefumarate reductase/succinate dehydrogenase flavoprotein-like protein3e-1584
NC_009921:5609770:5632068563206856337621695Frankia sp. EAN1pec, complete genomefumarate reductase/succinate dehydrogenase flavoprotein domain protein3e-1584
NC_014118:1592000:1613019161301916145991581Burkholderia sp. CCGE1002 chromosome chromosome 2, completefumarate reductase/succinate dehydrogenase flavoprotein domain protein6e-1582.8
NC_014830:3438504:3495126349512634965561431Intrasporangium calvum DSM 43043 chromosome, complete genomefumarate reductase/succinate dehydrogenase flavoprotein domain protein1e-1482
NC_008705:4053070:4072248407224840740291782Mycobacterium sp. KMS, complete genomefumarate reductase/succinate dehydrogenase flavoprotein domain protein1e-1482
NC_008146:4019711:4037766403776640395471782Mycobacterium sp. MCS, complete genomefumarate reductase/succinate dehydrogenase flavoprotein-like protein1e-1482
NC_014541:2510819:2531525253152525332911767Ferrimonas balearica DSM 9799 chromosome, complete genomeflavocytochrome c2e-1481.3
NC_016887:511034:5291575291575307971641Nocardia cyriacigeorgica GUH-2, complete genomeFumarate reductase/succinate dehydrogenase flavoprotein-like protein1e-1274.7
NC_013165:1584977:1586305158630515879781674Slackia heliotrinireducens DSM 20476, complete genomesuccinate dehydrogenase/fumarate reductase flavoprotein subunit2e-1274.7
NC_015602:1810500:1824768182476818266181851Lactobacillus kefiranofaciens ZW3 chromosome, complete genomesuccinate dehydrogenase2e-1274.3
NC_011830:2177187:2206085220608522078001716Desulfitobacterium hafniense DCB-2, complete genomefumarate reductase/succinate dehydrogenase flavoprotein domain protein2e-1274.3
NC_009092:2644164:2664207266420726657661560Shewanella loihica PV-4, complete genomeflavocytochrome c3e-1273.9
NC_014618:1809369:1809369180936918121462778Enterobacter cloacae SCF1 chromosome, complete genomeflavocytochrome c3e-1273.9
NC_015738:2773552:2780732278073227824051674Eggerthella sp. YY7918, complete genomehypothetical protein3e-1273.6
NC_014364:894373:8993928993929016082217Spirochaeta smaragdinae DSM 11293 chromosome, complete genomefumarate reductase/succinate dehydrogenase flavoprotein domain protein5e-1273.2
NC_016887:511034:5273145273145290141701Nocardia cyriacigeorgica GUH-2, complete genome3-ketosteroid-delta-1-dehydrogenase6e-1272.8
NC_010814:1336943:1344729134472913464381710Geobacter lovleyi SZ, complete genomefumarate reductase/succinate dehydrogenase flavoprotein domain protein2e-1171.2
NC_013171:416279:4282224282224299971776Anaerococcus prevotii DSM 20548, complete genomeflavocytochrome c2e-1171.2
NC_015278:538500:5565165565165583871872Aerococcus urinae ACS-120-V-Col10a chromosome, complete genomeflavocytochrome c2e-1170.9
NC_014830:3438504:3492220349222034937251506Intrasporangium calvum DSM 43043 chromosome, complete genomefumarate reductase/succinate dehydrogenase flavoprotein domain protein6e-1169.7
NC_015391:2488450:2489432248943224909341503Carnobacterium sp. 17-4 chromosome, complete genomeL-aspartate oxidase6e-1169.7
NC_015738:2956398:2962029296202929637111683Eggerthella sp. YY7918, complete genomehypothetical protein6e-1169.7
NC_013961:1622616:1622616162261616253932778Erwinia amylovora, complete genomefumarate reductase flavoprotein subunit8e-1169.3
NC_013971:1660144:1660144166014416629212778Erwinia amylovora ATCC 49946 chromosome, complete genomeNADH:flavin oxidoreductase8e-1169.3
NC_015577:2081196:2127831212783121301912361Treponema azotonutricium ZAS-9 chromosome, complete genomefumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein9e-1168.9
NC_006814:51500:6595665956671461191Lactobacillus acidophilus NCFM, complete genomefumarate reductase flavoprotein subunit1e-1068.6
NC_013204:3491441:3507113350711335087711659Eggerthella lenta DSM 2243, complete genomefumarate reductase/succinate dehydrogenase flavoprotein domain protein2e-1068.2
NC_017986:5605197:5633030563303056347451716Pseudomonas putida ND6 chromosome, complete genomePutative succinate dehydrogenase3e-1067.4
NC_008146:4936262:4939191493919149408311641Mycobacterium sp. MCS, complete genomefumarate reductase/succinate dehydrogenase flavoprotein-like protein4e-1067
NC_008705:4975402:4978211497821149799711761Mycobacterium sp. KMS, complete genomefumarate reductase/succinate dehydrogenase flavoprotein domain protein4e-1067
NC_009077:5286275:5287065528706552888251761Mycobacterium sp. JLS, complete genomefumarate reductase/succinate dehydrogenase flavoprotein domain protein4e-1067
NC_010694:2138000:2178003217800321807802778Erwinia tasmaniensis, complete genomePutative NADH:flavin oxidoreductase6e-1066.2
NC_007953:504939:5224405224405241221683Burkholderia xenovorans LB400 chromosome 3, complete sequencePutative dehydrogenase flavoprotein6e-1066.2
NC_013204:74855:9579995799973371539Eggerthella lenta DSM 2243, complete genomefumarate reductase/succinate dehydrogenase flavoprotein domain protein1e-0965.5
NC_015738:873653:8798938798938813681476Eggerthella sp. YY7918, complete genomehypothetical protein1e-0965.5
NC_015214:48999:6352863528652371710Lactobacillus acidophilus 30SC chromosome, complete genomefumarate reductase flavoprotein subunit7e-0962.8
NC_014724:59000:7385773857757161860Lactobacillus amylovorus GRL 1112 chromosome, complete genomefumarate reductase flavoprotein subunit1e-0862
NC_009483:936000:9565009565009582961797Geobacter uraniireducens Rf4 chromosome, complete genomefumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein3e-0860.8
NC_014246:57021:6074260742625501809Mobiluncus curtisii ATCC 43063 chromosome, complete genomeputative 3-oxosteroid 1-dehydrogenase4e-0860.5
NC_009715:167513:1796871796871811921506Campylobacter curvus 525.92 chromosome, complete genomeflavocytochrome c flavin subunit1e-0758.9
NC_009802:1659257:1674756167475616762911536Campylobacter concisus 13826, complete genomeflavoCytochrome c flavin subunit5e-0756.6
NC_007951:925442:9468139468139486031791Burkholderia xenovorans LB400 chromosome 1, complete sequencePutative dehydrogenase3e-0653.9