Pre_GI: BLASTN Hits

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Query: NC_009092:3783000 Shewanella loihica PV-4, complete genome

Start: 3783000, End: 3802099, Length: 19100

Host Lineage: Shewanella loihica; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain is an environmental isolate from the Naha Vents, Hawaii, in the Pacific Ocean. Psychrotolerant bacterium. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. Shewanella loihica is a psychrotolerant deep sea bacterium. This organism is able to reduce iron, manganese and uranium and may be useful for bioremediation at low temperatures.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_009092:36824133682413370194319531Shewanella loihica PV-4, complete genome1e-38168BLASTN svgBLASTP svg
NC_009092:26177826177828459922822Shewanella loihica PV-4, complete genome5e-35157BLASTN svgBLASTP svg
NC_009092:1047500*1047500107272925230Shewanella loihica PV-4, complete genome5e-29137BLASTN svgBLASTP svg
NC_009092:26441642644164266929125128Shewanella loihica PV-4, complete genome1e-26129BLASTN svgBLASTP svg
NC_009092:19352811935281195928524005Shewanella loihica PV-4, complete genome5e-26127BLASTN svgBLASTP svg
NC_009092:25295182529518255250622989Shewanella loihica PV-4, complete genome1e-23119BLASTN svgBLASTP svg
NC_009092:3057319*3057319308409726779Shewanella loihica PV-4, complete genome3e-21111BLASTN svgBLASTP svg
NC_012590:19389519389521817724283Corynebacterium aurimucosum ATCC 700975, complete genome6e-1693.7BLASTN svgBLASTP svg
NC_009092:13053551305355132893623582Shewanella loihica PV-4, complete genome6e-1693.7BLASTN svgBLASTP svg
NC_009092:32395003239500326129021791Shewanella loihica PV-4, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_011420:3650724*3650724367371922996Rhodospirillum centenum SW, complete genome2e-1281.8BLASTN svgBLASTP svg
NC_015953:4908069*4908069493639628328Streptomyces sp. SirexAA-E chromosome, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_015683:24137724137726784326467Corynebacterium ulcerans BR-AD22 chromosome, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_015458:3077804*3077804310090323100Pusillimonas sp. T7-7 chromosome, complete genome1e-1075.8BLASTN svgBLASTP svg
NC_009092:15043631504363158010375741Shewanella loihica PV-4, complete genome6e-1073.8BLASTN svgBLASTP svg
NC_008570:3083850*3083850310907525226Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genome6e-1073.8BLASTN svgBLASTP svg
NC_002488:1775629*1775629180340827780Xylella fastidiosa 9a5c, complete genome6e-1073.8BLASTN svgBLASTP svg
NC_014844:903877*90387792643122555Desulfovibrio aespoeensis Aspo-2 chromosome, complete genome2e-0971.9BLASTN svgBLASTP svg
NC_016002:1326500*1326500135490028401Pseudogulbenkiania sp. NH8B, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_010125:74904*749049987524972Gluconacetobacter diazotrophicus PAl 5, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_015424:2726223*2726223277096744745Aeromonas veronii B565 chromosome, complete genome1e-0765.9BLASTN svgBLASTP svg
NC_002516:4747154*4747154479172444571Pseudomonas aeruginosa PAO1, complete genome1e-0765.9BLASTN svgBLASTP svg