Pre_GI: BLASTP Hits

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Query: NC_009092:3783000:3791417 Shewanella loihica PV-4, complete genome

Start: 3791417, End: 3792193, Length: 777

Host Lineage: Shewanella loihica; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain is an environmental isolate from the Naha Vents, Hawaii, in the Pacific Ocean. Psychrotolerant bacterium. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. Shewanella loihica is a psychrotolerant deep sea bacterium. This organism is able to reduce iron, manganese and uranium and may be useful for bioremediation at low temperatures.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015663:1356982:138721113872111387990780Enterobacter aerogenes KCTC 2190 chromosome, complete genomehypothetical protein2e-83308
NC_007492:3384077:339360533936053394372768Pseudomonas fluorescens PfO-1, complete genomeBeta-lactamase-like3e-78291
NC_014973:4503054:450635145063514507124774Geobacter sp. M18 chromosome, complete genomebeta-lactamase domain-containing protein8e-74276
NC_014100:2782000:278723127872312788139909Caulobacter segnis ATCC 21756 chromosome, complete genomebeta-lactamase-like protein6e-67254
NC_017195:517344:524881524881525645765Bacillus subtilis subsp. subtilis str. RO-NN-1 chromosome, completeYddR4e-60231
NC_016047:637778:658697658697659461765Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, completehypothetical protein5e-60231
NC_000964:521975:553254553254554018765Bacillus subtilis subsp. subtilis str. 168, complete genomehypothetical protein5e-60231
NC_009524:861500:863452863452864366915Psychrobacter sp. PRwf-1 chromosome, complete genomebeta-lactamase fold-like Zn-dependent hydrolase8e-59226
NC_014479:509919:535896535896536657762Bacillus subtilis subsp. spizizenii str. W23 chromosome, completeputative beta-lactamase2e-58225
NC_009725:496443:503986503986504756771Bacillus amyloliquefaciens FZB42, complete genomeYddR2e-58225
NC_020410:495184:502715502715503476762Bacillus amyloliquefaciens subsp. plantarum UCMB5036 completeputative metal-dependent hydrolase3e-58224
NC_015690:3941113:395599139559913956749759Paenibacillus mucilaginosus KNP414 chromosome, complete genomeYddR21e-57223
NC_016047:2658000:266318426631842663945762Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, completemetallo-beta-lactamase superfamily protein5e-56217
NC_017195:517344:551586551586552347762Bacillus subtilis subsp. subtilis str. RO-NN-1 chromosome, completemetallo-beta-lactamase superfamily, putative7e-56217
NC_021184:2975975:299189829918982992677780Desulfotomaculum gibsoniae DSM 7213, complete genomeputative Zn-dependent hydrolase of beta-lactamase fold protein1e-53209
NC_019960:1658657:173244117324411733205765Prevotella dentalis DSM 3688 chromosome 1, complete sequenceputative Zn-dependent hydrolase of beta-lactamase fold protein6e-53207
NC_016641:2894899:292486529248652925617753Paenibacillus terrae HPL-003 chromosome, complete genomebeta-lactamase5e-43174
NC_014483:1146682:116347411634741164226753Paenibacillus polymyxa E681 chromosome, complete genomePredicted Zn-dependent hydrolase of the beta-lactamase fold7e-41167
NC_007645:6647500:664930066493006650133834Hahella chejuensis KCTC 2396, complete genomepredicted Zn-dependent Hydrolase of the beta-lactamase fold4e-24111
NC_014761:74500:881508815088800651Oceanithermus profundus DSM 14977 chromosome, complete genomezn-dependent hydrolase of the beta-lactamase fold protein4e-23108
NC_008095:6697789:6705408670540867065471140Myxococcus xanthus DK 1622, complete genomehypothetical protein1e-0963.9
NC_008228:816000:8380958380958391891095Pseudoalteromonas atlantica T6c, complete genomeZn-dependent hydrolase of the beta-lactamase fold9e-1063.9
NC_013131:10413240:104264271042642710427206780Catenulispora acidiphila DSM 44928, complete genomeZn-dependent hydrolase of the beta-lactamase fold-like protein3e-0858.9
NC_012660:5242392:5261928526192852629771050Pseudomonas fluorescens SBW25 chromosome, complete genomehypothetical protein1e-0757.4
NC_017030:9028412:9029885902988590309701086Corallococcus coralloides DSM 2259 chromosome, complete genomehypothetical protein2e-0756.6
NC_012881:1062629:1065808106580810669261119Desulfovibrio salexigens DSM 2638, complete genomeZn-dependent hydrolase4e-0652
NC_010506:537833:5539345539345550641131Shewanella woodyi ATCC 51908, complete genomeZn-dependent hydrolase of the beta-lactamase fold5e-0651.6
NC_007355:923218:9345229345229356491128Methanosarcina barkeri str. fusaro chromosome 1, complete sequenceouter membrane protein expression inhibitor7e-0651.2