Pre_GI Gene

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Host: NC_009092 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_009092:3239500 Shewanella loihica PV-4, complete genome

Host Lineage: Shewanella loihica; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain is an environmental isolate from the Naha Vents, Hawaii, in the Pacific Ocean. Psychrotolerant bacterium. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. Shewanella loihica is a psychrotolerant deep sea bacterium. This organism is able to reduce iron, manganese and uranium and may be useful for bioremediation at low temperatures.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
324001332418331821peptidase M1 membrane alanine aminopeptidaseQuickGO ontologyBLASTP
32420673242948882Microbial collagenaseQuickGO ontologyBLASTP
32429733243902930putative esteraseQuickGO ontologyBLASTP
32446463245404759hypothetical proteinBLASTP
32454553246135681hypothetical proteinBLASTP
32471413248112972phosphate binding proteinQuickGO ontologyBLASTP
324843632497281293PASPAC sensor signal transduction histidine kinaseQuickGO ontologyBLASTP
32500453250770726two component transcriptional regulator winged helix familyQuickGO ontologyBLASTP
32509223251872951porin Gram-negative typeQuickGO ontologyBLASTP
32521743253085912putative exonuclease RdgCQuickGO ontologyBLASTP
325324632550421797peptidase M61 domain proteinQuickGO ontologyBLASTP
325517032573262157Tetratricopeptide TPR_2 repeat proteinQuickGO ontologyBLASTP
325751832590741557diguanylate cyclaseQuickGO ontologyBLASTP
325914932605011353conserved hypothetical protein 730QuickGO ontologyBLASTP
326052032612907715-3 exonucleaseQuickGO ontologyBLASTP