Pre_GI Gene

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Host: NC_009092 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_009092:2529518 Shewanella loihica PV-4, complete genome

Host Lineage: Shewanella loihica; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain is an environmental isolate from the Naha Vents, Hawaii, in the Pacific Ocean. Psychrotolerant bacterium. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. Shewanella loihica is a psychrotolerant deep sea bacterium. This organism is able to reduce iron, manganese and uranium and may be useful for bioremediation at low temperatures.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
252761125295211911surface antigen D15QuickGO ontologyBLASTP
252951825334173900protein of unknown function DUF490QuickGO ontologyBLASTP
25335072534268762fatty acid responsive transcription factor FadR domain proteinQuickGO ontologyBLASTP
253456725361621596NaH antiporter NhaBQuickGO ontologyBLASTP
25362502536765516Disulphide bond formation protein DsbBQuickGO ontologyBLASTP
25376782538274597hypothetical protein
25384062538651246hypothetical proteinBLASTP
25388002539717918hypothetical proteinBLASTP
25397072540279573hypothetical proteinBLASTP
25414322541911480protein of unknown function UPF0153QuickGO ontologyBLASTP
25419872542976990putative transglycosylaseQuickGO ontologyBLASTP
25432612543542282protein of unknown function DUF709QuickGO ontologyBLASTP
25436692544334666septum site-determining protein MinCQuickGO ontologyBLASTP
25443592545168810septum site-determining protein MinDQuickGO ontologyBLASTP
25451712545431261cell division topological specificity factor MinEQuickGO ontologyBLASTP
254554125466471107ribonuclease DQuickGO ontologyBLASTP
254673825484111674AMP-dependent synthetase and ligaseQuickGO ontologyBLASTP
25486102549545936alphabeta hydrolase foldQuickGO ontologyBLASTP
25495482550396849hypothetical proteinBLASTP
25504792551180702hypothetical proteinBLASTP
25513262551697372hypothetical protein
25517632552506744peptidase M22 glycoproteaseQuickGO ontologyBLASTP