Pre_GI: BLASTN Hits

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Query: NC_008309:502983 Haemophilus somnus 129PT, complete genome

Start: 502983, End: 529268, Length: 26286

Host Lineage: Histophilus somni; Histophilus; Pasteurellaceae; Pasteurellales; Proteobacteria; Bacteria

General Information: This strain is an asymptomatic carrier strain that was serum-resistant. Causes disease in cattle. A group of organisms that are either obligate parasites or commensal organisms found in animal mucous membranes. Almost all species require the presence of important growth factors found in the blood of their hosts, including either X factor (protoporphyrin IX or heme) or V factor (nicotinamide adenine dinucleotide (NAD or NADP)). This organism is a major cause of disease in feedlot cattle. It causes constriction of blood vessels supplying major organs, restricting blood supply which leads to reduced oxygen delivery, and leads to tissue damage and death. The diseases that result are pneumonia, arthritis, myocarditis (inflammation of heart muscle), and reproductive problems resulting in the loss of millions of dollars in animals each year.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_008309:15533991553399158822334825Haemophilus somnus 129PT, complete genome0955BLASTN svgBLASTP svg
NC_009053:2025782*2025782204904723266Actinobacillus pleuropneumoniae L20, complete genome0696BLASTN svgBLASTP svg
NC_008309:1851189*1851189187944728259Haemophilus somnus 129PT, complete genome2e-149537BLASTN svgBLASTP svg
NC_008309:38559238559240909923508Haemophilus somnus 129PT, complete genome5e-79303BLASTN svgBLASTP svg
NC_008309:12893701289370131490625537Haemophilus somnus 129PT, complete genome3e-68268BLASTN svgBLASTP svg
NC_009053:393700*39370041964225943Actinobacillus pleuropneumoniae L20, complete genome1e-51212BLASTN svgBLASTP svg
NC_010939:405477*40547744742441948Actinobacillus pleuropneumoniae serovar 7 str. AP76, complete1e-51212BLASTN svgBLASTP svg
NC_008309:19055019055022259932050Haemophilus somnus 129PT, complete genome1e-36163BLASTN svgBLASTP svg
NC_008309:11552181155218117824923032Haemophilus somnus 129PT, complete genome7e-29137BLASTN svgBLASTP svg
NC_008309:84207284207286931527244Haemophilus somnus 129PT, complete genome1e-27133BLASTN svgBLASTP svg
NC_008309:1200245*1200245121859918355Haemophilus somnus 129PT, complete genome1e-27133BLASTN svgBLASTP svg
NC_015224:4473230*4473230449714523916Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,2e-22115BLASTN svgBLASTP svg
NC_012214:3931824*3931824395459922776Erwinia pyrifoliae Ep1/96, complete genome4e-21111BLASTN svgBLASTP svg
NC_015224:35875003587500361767930180Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,6e-1797.6BLASTN svgBLASTP svg
NC_008309:18278091827809185114023332Haemophilus somnus 129PT, complete genome6e-1797.6BLASTN svgBLASTP svg
NC_013416:820989*82098984592424936Aggregatibacter actinomycetemcomitans D11S-1, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_013961:3709800*3709800373182522026Erwinia amylovora, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_006905:3780000*3780000380296822969Salmonella enterica subsp. enterica serovar Choleraesuis str2e-1385.7BLASTN svgBLASTP svg
NC_012912:1200000*1200000122694026941Dickeya zeae Ech1591, complete genome8e-1383.8BLASTN svgBLASTP svg
NC_003143:483395*48339550335019956Yersinia pestis CO92, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_004088:41166764116676413528618611Yersinia pestis KIM, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_005810:42245004224500424264818149Yersinia pestis biovar Microtus str. 91001, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_006155:713174*71317473201318840Yersinia pseudotuberculosis IP 32953, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_008149:402599*40259942390621308Yersinia pestis Nepal516, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_008150:4561633*4561633458159919967Yersinia pestis Antiqua, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_010159:80966380966383240722745Yersinia pestis Angola, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_010465:39587663958766397730818543Yersinia pseudotuberculosis YPIII, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_004337:3590323*35903233952993362671Shigella flexneri 2a str. 301, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_003143:74116974116977078329615Yersinia pestis CO92, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_004088:38591733859173388653627364Yersinia pestis KIM, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_005810:33330003333000336198528986Yersinia pestis biovar Microtus str. 91001, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_006155:39928183992818402295130134Yersinia pseudotuberculosis IP 32953, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_008149:65070665070667964628941Yersinia pestis Nepal516, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_008150:34300003430000345505925060Yersinia pestis Antiqua, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_010159:25969525969528600726313Yersinia pestis Angola, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_010465:73391673391676156927654Yersinia pseudotuberculosis YPIII, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_010634:39053693905369393440829040Yersinia pseudotuberculosis PB1/+, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_010102:283364*28336430624522882Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,5e-0867.9BLASTN svgBLASTP svg
NC_007613:29818292981829300438522557Shigella boydii Sb227, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_013416:12468801246880126998923110Aggregatibacter actinomycetemcomitans D11S-1, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_015964:1389628*1389628140919019563Haemophilus parainfluenzae T3T1, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_005139:2731623*2731623275419322571Vibrio vulnificus YJ016 chromosome I, complete sequence8e-0763.9BLASTN svgBLASTP svg
NC_004459:1679335*1679335170642427090Vibrio vulnificus CMCP6 chromosome I, complete sequence8e-0763.9BLASTN svgBLASTP svg
NC_014109:27500*275005209924600Candidatus Riesia pediculicola USDA chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_004344:12979812979815484225045Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis,3e-0661.9BLASTN svgBLASTP svg