Pre_GI: BLASTN Hits

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Query: NC_007951:3655088 Burkholderia xenovorans LB400 chromosome 1, complete sequence

Start: 3655088, End: 3688599, Length: 33512

Host Lineage: Burkholderia xenovorans; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Originally identified as Pseudomonas sp. LB400 that was found in contaminated soil in upstate New York, USA, this organism is now classified in the genus Burkholderia. Polychlorinated biphenyl-degrading bacterium. Member of the genus Burkholderia are versatile organisms that occupy a surprisingly wide range of ecological niches. These bacteria are exploited for biocontrol, bioremediation, and plant growth promotion purposes. Burkholderia xenovorans has been found on fungi, animals, and from human clinical isolates such as from cystic fibrosis (CF) patients. It may be tightly associated with white-rot fungus, as the degadation of lignin by the fungus results in aromatic compounds the bacterium can then degrade. This organism is exceptionally capable of degradation of polychlorinated biphenyls (PCBs), which are environmental pollutants, and thus it may play a role in bioremediation of polluted and toxic sites and is studied as a model bioremediator. PCBs can be utilized as the sole carbon and energy source by this organism. The pathways for degradation of PCBs have been extensively characterized at both the genetic and the molecular level and have become a model system for the bacterial breakdown of these very persistent environmental contaminants.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_010170:1580832*1580832159859917768Bordetella petrii, complete genome014780BLASTN svgBLASTP svg
NC_007952:15875001587500160777020271Burkholderia xenovorans LB400 chromosome 2, complete sequence06686BLASTN svgBLASTP svg
NC_007951:17112231711223173758426362Burkholderia xenovorans LB400 chromosome 1, complete sequence06684BLASTN svgBLASTP svg
NC_010676:2869936*2869936289564625711Burkholderia phytofirmans PsJN chromosome 2, complete sequence06375BLASTN svgBLASTP svg
NC_010676:27200682720068275384233775Burkholderia phytofirmans PsJN chromosome 2, complete sequence06373BLASTN svgBLASTP svg
NC_008750:45023345023347009919867Shewanella sp. W3-18-1, complete genome06347BLASTN svgBLASTP svg
NC_011901:491783*49178352043828656Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, complete06266BLASTN svgBLASTP svg
NC_010611:24083924083927225731419Acinetobacter baumannii ACICU, complete genome05660BLASTN svgBLASTP svg
NC_010410:36068263606826369540988584Acinetobacter baumannii AYE, complete genome05660BLASTN svgBLASTP svg
NC_010170:39442283944228399478350556Bordetella petrii, complete genome04958BLASTN svgBLASTP svg
NC_014836:29195082919508294399924492Desulfurispirillum indicum S5 chromosome, complete genome04950BLASTN svgBLASTP svg
NC_010681:12164712164714763125985Burkholderia phytofirmans PsJN chromosome 1, complete sequence04835BLASTN svgBLASTP svg
NC_010170:1324758*1324758137344648689Bordetella petrii, complete genome02553BLASTN svgBLASTP svg
NC_007722:21720002172000219518323184Erythrobacter litoralis HTCC2594, complete genome02436BLASTN svgBLASTP svg
NC_002488:16389461638946170065561710Xylella fastidiosa 9a5c, complete genome02246BLASTN svgBLASTP svg
NC_014836:16065871606587162498218396Desulfurispirillum indicum S5 chromosome, complete genome01699BLASTN svgBLASTP svg
NC_011992:1179084*1179084120383024747Acidovorax ebreus TPSY, complete genome01275BLASTN svgBLASTP svg
NC_012691:2614603*26146032727599112997Tolumonas auensis DSM 9187, complete genome01082BLASTN svgBLASTP svg
NC_015740:29985002998500301617517676Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, complete0999BLASTN svgBLASTP svg
NC_010508:1206498*1206498122498518488Burkholderia cenocepacia MC0-3 chromosome 1, complete sequence0785BLASTN svgBLASTP svg
NC_008782:1277117*1277117129923122115Acidovorax sp. JS42, complete genome0775BLASTN svgBLASTP svg
NC_010688:2400471*2400471242735326883Xanthomonas campestris pv. campestris, complete genome0714BLASTN svgBLASTP svg
NC_007086:2408837*2408837243103522199Xanthomonas campestris pv. campestris str. 8004, complete genome0714BLASTN svgBLASTP svg
NC_003902:2469500*2469500250580636307Xanthomonas campestris pv. campestris str. ATCC 33913, complete0714BLASTN svgBLASTP svg
NC_014366:58834758834761001621670Gamma proteobacterium HdN1, complete genome6e-76293BLASTN svgBLASTP svg
NC_009434:3611738*36117383748875137138Pseudomonas stutzeri A1501, complete genome2e-51212BLASTN svgBLASTP svg
NC_007298:2170181*2170181219259922419Dechloromonas aromatica RCB, complete genome3e-44188BLASTN svgBLASTP svg
NC_015740:12917391291739131529623558Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, complete2e-42182BLASTN svgBLASTP svg
NC_008782:2062962*2062962208700324042Acidovorax sp. JS42, complete genome4e-40174BLASTN svgBLASTP svg
NC_008344:1*13873538735Nitrosomonas eutropha C91, complete genome1e-36163BLASTN svgBLASTP svg
NC_008825:25649652564965258966024696Methylibium petroleiphilum PM1, complete genome2e-35159BLASTN svgBLASTP svg
NC_020064:1854589*1854589187841223824Serratia marcescens FGI94, complete genome5e-30141BLASTN svgBLASTP svg
NC_019902:979879798712071322727Thioalkalivibrio nitratireducens DSM 14787, complete genome3e-28135BLASTN svgBLASTP svg
NC_014153:2282725*2282725230725524531Thiomonas intermedia K12 chromosome, complete genome2e-26129BLASTN svgBLASTP svg
NC_003919:2435058*2435058245860723550Xanthomonas axonopodis pv. citri str. 306, complete genome2e-26129BLASTN svgBLASTP svg
NC_015740:2692023*2692023271734525323Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, complete2e-23119BLASTN svgBLASTP svg
NC_007645:2628423*2628423265192123499Hahella chejuensis KCTC 2396, complete genome2e-23119BLASTN svgBLASTP svg
NC_013508:2130681*2130681216209931419Edwardsiella tarda EIB202, complete genome8e-23117BLASTN svgBLASTP svg
NC_007484:1823751*1823751186794644196Nitrosococcus oceani ATCC 19707, complete genome1e-21113BLASTN svgBLASTP svg
NC_014212:319815*31981533968619872Meiothermus silvanus DSM 9946 chromosome, complete genome1e-21113BLASTN svgBLASTP svg
NC_014212:3206860*3206860322629919440Meiothermus silvanus DSM 9946 chromosome, complete genome1e-21113BLASTN svgBLASTP svg
NC_019940:2893535*2893535291820624672Thioflavicoccus mobilis 8321 chromosome, complete genome1e-21113BLASTN svgBLASTP svg
NC_015387:2042042*2042042206360521564Marinithermus hydrothermalis DSM 14884 chromosome, complete genome5e-21111BLASTN svgBLASTP svg
NC_013416:820989*82098984592424936Aggregatibacter actinomycetemcomitans D11S-1, complete genome5e-21111BLASTN svgBLASTP svg
NC_007948:4558000*4558000461212254123Polaromonas sp. JS666, complete genome5e-21111BLASTN svgBLASTP svg
NC_007298:1129889*1129889115580225914Dechloromonas aromatica RCB, complete genome5e-21111BLASTN svgBLASTP svg
NC_009085:131000*13100015492623927Acinetobacter baumannii ATCC 17978, complete genome2e-20109BLASTN svgBLASTP svg
NC_007880:290059*29005931361823560Francisella tularensis subsp. holarctica, complete genome7e-20107BLASTN svgBLASTP svg
NC_008369:291640*29164031483523196Francisella tularensis subsp. holarctica OSU18, complete genome7e-20107BLASTN svgBLASTP svg
NC_009749:289695*28969530981820124Francisella tularensis subsp. holarctica FTA, complete genome7e-20107BLASTN svgBLASTP svg
NC_014500:3097362*3097362318793090569Dickeya dadantii 3937 chromosome, complete genome7e-20107BLASTN svgBLASTP svg
NC_003454:249304*24930426978820485Fusobacterium nucleatum subsp. nucleatum ATCC 25586, complete3e-19105BLASTN svgBLASTP svg
NC_006570:1526071*1526071154588919819Francisella tularensis subsp. tularensis Schu 4, complete genome3e-19105BLASTN svgBLASTP svg
NC_008245:1525877*1525877155460728731Francisella tularensis subsp. tularensis FSC 198, complete genome3e-19105BLASTN svgBLASTP svg
NC_008601:1560482*1560482160300942528Francisella tularensis subsp. novicida U112, complete genome3e-19105BLASTN svgBLASTP svg
NC_008740:1357312*1357312138014322832Marinobacter aquaeolei VT8, complete genome3e-19105BLASTN svgBLASTP svg
NC_010611:154307*15430717821523909Acinetobacter baumannii ACICU, complete genome3e-19105BLASTN svgBLASTP svg
NC_010677:456277*45627747729321017Francisella tularensis subsp. mediasiatica FSC147, complete genome3e-19105BLASTN svgBLASTP svg
NC_011027:1488455*1488455150948721033Chlorobaculum parvum NCIB 8327, complete genome3e-19105BLASTN svgBLASTP svg
NC_013416:875758*87575890109925342Aggregatibacter actinomycetemcomitans D11S-1, complete genome3e-19105BLASTN svgBLASTP svg
NC_013592:1668092*1668092170683538744Dickeya dadantii Ech586, complete genome3e-19105BLASTN svgBLASTP svg
NC_014221:266638*26663829153224895Truepera radiovictrix DSM 17093 chromosome, complete genome3e-19105BLASTN svgBLASTP svg
NC_015731:1062824*1062824108197319150Nitrosomonas sp. Is79A3 chromosome, complete genome3e-19105BLASTN svgBLASTP svg
NC_009512:4287605*4287605432250934905Pseudomonas putida F1, complete genome1e-18103BLASTN svgBLASTP svg
NC_014500:4257145*4257145428370126557Dickeya dadantii 3937 chromosome, complete genome1e-18103BLASTN svgBLASTP svg
NC_014958:629459*62945965461225154Deinococcus maricopensis DSM 21211 chromosome, complete genome1e-18103BLASTN svgBLASTP svg
NC_015379:5002595*5002595502209219498Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,1e-18103BLASTN svgBLASTP svg
NC_015733:1680500*1680500170310522606Pseudomonas putida S16 chromosome, complete genome1e-18103BLASTN svgBLASTP svg
NC_014762:2428721*2428721245871529995Sulfuricurvum kujiense DSM 16994 chromosome, complete genome5e-18101BLASTN svgBLASTP svg
NC_014837:1570500*1570500160135230853Pantoea sp. At-9b chromosome, complete genome5e-18101BLASTN svgBLASTP svg
NC_014958:1268559*1268559129322524667Deinococcus maricopensis DSM 21211 chromosome, complete genome5e-18101BLASTN svgBLASTP svg
NC_014958:514225*51422553849724273Deinococcus maricopensis DSM 21211 chromosome, complete genome5e-18101BLASTN svgBLASTP svg
NC_015379:2417312*2417312246459947288Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,5e-18101BLASTN svgBLASTP svg
NC_015566:1941407*1941407196269221286Serratia sp. AS12 chromosome, complete genome5e-18101BLASTN svgBLASTP svg
NC_006512:696000*69600071719521196Idiomarina loihiensis L2TR, complete genome2e-1799.6BLASTN svgBLASTP svg
NC_006155:2084669*2084669210379619128Yersinia pseudotuberculosis IP 32953, complete genome2e-1799.6BLASTN svgBLASTP svg
NC_005810:1663672*1663672168742323752Yersinia pestis biovar Microtus str. 91001, complete genome2e-1799.6BLASTN svgBLASTP svg
NC_004547:3207776*3207776324611038335Erwinia carotovora subsp. atroseptica SCRI1043, complete genome2e-1799.6BLASTN svgBLASTP svg
NC_004129:4093610*4093610411954425935Pseudomonas fluorescens Pf-5, complete genome2e-1799.6BLASTN svgBLASTP svg
NC_004088:2691565*2691565271495023386Yersinia pestis KIM, complete genome2e-1799.6BLASTN svgBLASTP svg
NC_003143:2101902*2101902212009918198Yersinia pestis CO92, complete genome2e-1799.6BLASTN svgBLASTP svg
NC_008149:2517538*2517538254015722620Yersinia pestis Nepal516, complete genome2e-1799.6BLASTN svgBLASTP svg
NC_008150:1384102*1384102140260518504Yersinia pestis Antiqua, complete genome2e-1799.6BLASTN svgBLASTP svg
NC_015224:2061951*2061951208443822488Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,2e-1799.6BLASTN svgBLASTP svg
NC_013946:879199*87919990227423076Meiothermus ruber DSM 1279 chromosome, complete genome2e-1799.6BLASTN svgBLASTP svg
NC_013946:2854219*2854219287538821170Meiothermus ruber DSM 1279 chromosome, complete genome2e-1799.6BLASTN svgBLASTP svg
NC_013446:1889500*1889500191816228663Comamonas testosteroni CNB-2, complete genome2e-1799.6BLASTN svgBLASTP svg
NC_010465:2582080*2582080260359921520Yersinia pseudotuberculosis YPIII, complete genome2e-1799.6BLASTN svgBLASTP svg
NC_010159:2128157*2128157214655218396Yersinia pestis Angola, complete genome2e-1799.6BLASTN svgBLASTP svg
NC_008463:2654014*2654014267605522042Pseudomonas aeruginosa UCBPP-PA14, complete genome2e-1799.6BLASTN svgBLASTP svg
NC_007492:3462929*3462929350940646478Pseudomonas fluorescens PfO-1, complete genome7e-1797.6BLASTN svgBLASTP svg
NC_006177:835459*83545985883523377Symbiobacterium thermophilum IAM 14863, complete genome7e-1797.6BLASTN svgBLASTP svg
NC_006177:280234*28023431920738974Symbiobacterium thermophilum IAM 14863, complete genome7e-1797.6BLASTN svgBLASTP svg
NC_006177:12383*123833284720465Symbiobacterium thermophilum IAM 14863, complete genome7e-1797.6BLASTN svgBLASTP svg
NC_001263:2574755*2574755260020025446Deinococcus radiodurans R1 chromosome 1, complete sequence7e-1797.6BLASTN svgBLASTP svg
NC_001263:243000*24300026750924510Deinococcus radiodurans R1 chromosome 1, complete sequence7e-1797.6BLASTN svgBLASTP svg
NC_001263:2236777*2236777225909922323Deinococcus radiodurans R1 chromosome 1, complete sequence7e-1797.6BLASTN svgBLASTP svg
NC_008025:1998500*1998500202271224213Deinococcus geothermalis DSM 11300, complete genome7e-1797.6BLASTN svgBLASTP svg
NC_008025:316302*31630236590049599Deinococcus geothermalis DSM 11300, complete genome7e-1797.6BLASTN svgBLASTP svg
NC_016024:156000*15600017748221483Candidatus Chloracidobacterium thermophilum B chromosome chromosome7e-1797.6BLASTN svgBLASTP svg
NC_018691:2214464*2214464224165927196Alcanivorax dieselolei B5 chromosome, complete genome7e-1797.6BLASTN svgBLASTP svg
NC_015733:3923800*3923800394679722998Pseudomonas putida S16 chromosome, complete genome7e-1797.6BLASTN svgBLASTP svg
NC_012912:1701231*1701231174963148401Dickeya zeae Ech1591, complete genome7e-1797.6BLASTN svgBLASTP svg
NC_012526:520947*52094754539024444Deinococcus deserti VCD115, complete genome7e-1797.6BLASTN svgBLASTP svg
NC_012526:2483000*2483000250920026201Deinococcus deserti VCD115, complete genome7e-1797.6BLASTN svgBLASTP svg
NC_012526:131000*13100014992418925Deinococcus deserti VCD115, complete genome7e-1797.6BLASTN svgBLASTP svg
NC_007712:1954808*1954808197959924792Sodalis glossinidius str. 'morsitans', complete genome3e-1695.6BLASTN svgBLASTP svg
NC_012880:1711062*1711062173095119890Dickeya dadantii Ech703, complete genome3e-1695.6BLASTN svgBLASTP svg
NC_015161:162000*16200018601224013Deinococcus proteolyticus MRP chromosome, complete genome3e-1695.6BLASTN svgBLASTP svg
NC_015161:2018493*2018493204698428492Deinococcus proteolyticus MRP chromosome, complete genome3e-1695.6BLASTN svgBLASTP svg
NC_015161:84526*8452611315728632Deinococcus proteolyticus MRP chromosome, complete genome3e-1695.6BLASTN svgBLASTP svg
NC_015422:16943631694363172115326791Alicycliphilus denitrificans K601 chromosome, complete genome4e-1591.7BLASTN svgBLASTP svg
NC_015185:1414453*1414453144663332181Desulfurobacterium thermolithotrophum DSM 11699 chromosome,4e-1591.7BLASTN svgBLASTP svg
NC_015177:1131173*1131173117511143939Pedobacter saltans DSM 12145 chromosome, complete genome4e-1591.7BLASTN svgBLASTP svg
NC_006138:656000*65600067877622777Desulfotalea psychrophila LSv54, complete genome4e-1591.7BLASTN svgBLASTP svg
NC_009089:1*13459934599Clostridium difficile 630, complete genome2e-1489.7BLASTN svgBLASTP svg
NC_010524:2761394*2761394278436822975Leptothrix cholodnii SP-6, complete genome2e-1489.7BLASTN svgBLASTP svg
NC_013316:1*14895548955Clostridium difficile R20291, complete genome2e-1489.7BLASTN svgBLASTP svg
NC_014974:404015*40401542533521321Thermus scotoductus SA-01 chromosome, complete genome2e-1489.7BLASTN svgBLASTP svg
NC_015422:1643000*1643000166547622477Alicycliphilus denitrificans K601 chromosome, complete genome2e-1489.7BLASTN svgBLASTP svg
NC_013729:3573000*3573000359711224113Kribbella flavida DSM 17836, complete genome7e-1487.7BLASTN svgBLASTP svg
NC_013316:120759*12075915711036352Clostridium difficile R20291, complete genome7e-1487.7BLASTN svgBLASTP svg
NC_009089:117980*11798016311645137Clostridium difficile 630, complete genome7e-1487.7BLASTN svgBLASTP svg
NC_005061:65861*658618718421324Candidatus Blochmannia floridanus, complete genome3e-1385.7BLASTN svgBLASTP svg
NC_009802:1917917*1917917194043822522Campylobacter concisus 13826, complete genome3e-1385.7BLASTN svgBLASTP svg
NC_020125:288706*28870631234423639Riemerella anatipestifer RA-CH-2, complete genome3e-1385.7BLASTN svgBLASTP svg
NC_015437:2164997*2164997218559920603Selenomonas sputigena ATCC 35185 chromosome, complete genome1e-1283.8BLASTN svgBLASTP svg
NC_003228:2973266*2973266299679923534Bacteroides fragilis NCTC 9343, complete genome4e-1281.8BLASTN svgBLASTP svg
NC_006347:2899653*2899653292225722605Bacteroides fragilis YCH46, complete genome4e-1281.8BLASTN svgBLASTP svg
NC_014394:1658357*1658357168283924483Gallionella capsiferriformans ES-2 chromosome, complete genome4e-1281.8BLASTN svgBLASTP svg
NC_014721:2012751*2012751203422421474Caldicellulosiruptor kristjanssonii 177R1B chromosome, complete4e-1281.8BLASTN svgBLASTP svg
NC_014935:31020*310205039419375Nitratifractor saLSUginis DSM 16511 chromosome, complete genome2e-1179.8BLASTN svgBLASTP svg
NC_020054:1335699*1335699135810022402Fibrella aestuarina BUZ 2 drat genome7e-1177.8BLASTN svgBLASTP svg
NC_013730:7458076*7458076747729019215Spirosoma linguale DSM 74, complete genome7e-1177.8BLASTN svgBLASTP svg
NC_015740:26143172614317265004935733Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, complete3e-1075.8BLASTN svgBLASTP svg
NC_011992:1234610*1234610125759922990Acidovorax ebreus TPSY, complete genome1e-0973.8BLASTN svgBLASTP svg
NC_008782:2781229*2781229280258121353Acidovorax sp. JS42, complete genome1e-0973.8BLASTN svgBLASTP svg
NC_006513:1379735*1379735146218482450Azoarcus sp. EbN1, complete genome4e-0971.9BLASTN svgBLASTP svg
NC_014909:86000*8600012150135502Candidatus Blochmannia vafer str. BVAF chromosome, complete genome4e-0971.9BLASTN svgBLASTP svg
NC_014393:92500*9250013027937780Clostridium cellulovorans 743B chromosome, complete genome6e-0867.9BLASTN svgBLASTP svg
NC_012563:3580000*3580000360253222533Clostridium botulinum A2 str. Kyoto, complete genome6e-0867.9BLASTN svgBLASTP svg
NC_010520:3526883*3526883355123524353Clostridium botulinum A3 str. Loch Maree, complete genome6e-0867.9BLASTN svgBLASTP svg
NC_008609:27872742787274281055923286Pelobacter propionicus DSM 2379, complete genome6e-0867.9BLASTN svgBLASTP svg
NC_011146:33768163376816340354026725Geobacter bemidjiensis Bem, complete genome3e-0765.9BLASTN svgBLASTP svg
NC_011146:3537546*3537546356804230497Geobacter bemidjiensis Bem, complete genome3e-0765.9BLASTN svgBLASTP svg
NC_021182:93000*9300014465551656Clostridium pasteurianum BC1, complete genome3e-0765.9BLASTN svgBLASTP svg
NC_007517:19983421998342201619717856Geobacter metallireducens GS-15, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_010002:45084674508467453496626500Delftia acidovorans SPH-1, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_010814:30484413048441309610947669Geobacter lovleyi SZ, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_010816:1274702*1274702129873624035Bifidobacterium longum DJO10A, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_014759:3572500*3572500360200929510Marivirga tractuosa DSM 4126 chromosome, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_008752:35955163595516362337527860Acidovorax avenae subsp. citrulli AAC00-1, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_008752:32176953217695323954921855Acidovorax avenae subsp. citrulli AAC00-1, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_008752:29369332936933297832941397Acidovorax avenae subsp. citrulli AAC00-1, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_008752:1523768*1523768154381320046Acidovorax avenae subsp. citrulli AAC00-1, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_007086:1224867*1224867128273457868Xanthomonas campestris pv. campestris str. 8004, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_003902:3666544*3666544374180275259Xanthomonas campestris pv. campestris str. ATCC 33913, complete4e-0661.9BLASTN svgBLASTP svg