Pre_GI Gene

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Host: NC_006177 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_006177:835459 Symbiobacterium thermophilum IAM 14863, complete genome

Host Lineage: Symbiobacterium thermophilum; Symbiobacterium; Shewanellaceae; Clostridiales; Firmicutes; Bacteria

General Information: This symbiotic and thermophilic bacterium was discovered by screening for thermostable tryptanophases in Japanese compost. Cultured growth of this organism requires the presence of another bacterial species, such as a Bacillus or Escherichia coli, which provides diffusable metabolites required for its growth. Pure cultures can be obtained by growing Symbiobacterium thermophilum in a bioreactor, separated from its symbiotic counterpart by a dialysis membrane. Because of its symbiotic nature, it cannot be cultured with conventional methods. Despite a negative reaction for gram stain, this species is placed with the gram-positive bacteria based on 16s phylogenetic analysis.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
835459836166708two-component response regulator probably involved in phosphate sensingQuickGO ontologyBLASTP
836194837048855phosphate ABC transporter phosphate-binding proteinQuickGO ontologyBLASTP
8371228383211200putative UDP-glucuronosyltransferaseQuickGO ontologyBLASTP
838380839096717hypothetical protein
8392688410971830oligoendopeptidaseQuickGO ontologyBLASTP
84122084129980tRNA-MetQuickGO ontology
84143984151779tRNA-AlaQuickGO ontology
84152184161393tRNA-SerQuickGO ontologyBLASTP
84165684173479tRNA-LysQuickGO ontologyBLASTP
84173784181579tRNA-GluQuickGO ontologyBLASTP
84182284191392tRNA-SerQuickGO ontology
84192184199777tRNA-GlnQuickGO ontology
84200084207778tRNA-AsnQuickGO ontology
84207884215679tRNA-GlyQuickGO ontologyBLASTP
84216084223879tRNA-AlaQuickGO ontologyBLASTP
84227084234879tRNA-ValQuickGO ontologyBLASTP
84249984257880tRNA-AspQuickGO ontologyBLASTP
842815844386157216S ribosomal RNAQuickGO ontologyBLASTP
844671847619294923S ribosomal RNAQuickGO ontologyBLASTP
8476638477761145S ribosomal RNAQuickGO ontologyBLASTP
8483148522553942minor extracellular serine proteaseQuickGO ontologyBLASTP
852268852855588hypothetical protein
8532008544501251Na-driven multidrug efflux proteinQuickGO ontologyBLASTP
854613855389777ABC transporter permease proteinQuickGO ontologyBLASTP
855390856103714ABC transporter ATP-binding proteinQuickGO ontologyBLASTP
8561168571921077ABC transporter substrate-binding proteinQuickGO ontologyBLASTP
857194857982789phosphate ABC transporter ATP-binding proteinQuickGO ontologyBLASTP
857984858835852phosphate ABC transporter permease proteinQuickGO ontologyBLASTP