Pre_GI: BLASTN Hits

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Query: NC_007778:1053462 Rhodopseudomonas palustris HaA2, complete genome

Start: 1053462, End: 1079599, Length: 26138

Host Lineage: Rhodopseudomonas palustris; Rhodopseudomonas; Bradyrhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: Four different strains were isolated from 2 sites, one pristine and one polluted. Environmental bacterium with potential use in bioremediation. This organism has a diverse metabolism and is capable of growth using light, inorganic, or organic compounds as energy sources and carbon dioxide or organic compounds as carbon sources. Commonly found in soil and water environments this bacterium is also capable of degrading a wide range of toxic organic compounds, and may be of use in bioremediation of polluted sites. The bacterium undergoes differentiation to produce a stalked nonmotile cell and a motile flagellated cell. In the presence of light, this bacterium produces a number of intracellular membranous vesicles to house the photosynthetic reaction centers.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_011004:5520771*5520771554678126011Rhodopseudomonas palustris TIE-1, complete genome0682BLASTN svgBLASTP svg
NC_005296:5238882*5238882526489126010Rhodopseudomonas palustris CGA009, complete genome0668BLASTN svgBLASTP svg
NC_021150:19652641965264198887523612Azotobacter vinelandii CA6, complete genome2e-75291BLASTN svgBLASTP svg
NC_012560:19652511965251198886223612Azotobacter vinelandii DJ, complete genome2e-75291BLASTN svgBLASTP svg
NC_009092:15043631504363158010375741Shewanella loihica PV-4, complete genome1e-30143BLASTN svgBLASTP svg
NC_016027:2387832*2387832241009922268Gluconacetobacter xylinus NBRC 3288, complete genome2e-25125BLASTN svgBLASTP svg
NC_010505:21038872103887213081426928Methylobacterium radiotolerans JCM 2831, complete genome1e-24123BLASTN svgBLASTP svg
NC_014394:25779492577949260071922771Gallionella capsiferriformans ES-2 chromosome, complete genome4e-24121BLASTN svgBLASTP svg
NC_011757:748223*74822379542247200Methylobacterium chloromethanicum CM4, complete genome6e-23117BLASTN svgBLASTP svg
NC_013858:47729847729850922131924Azospirillum sp. B510 plasmid pAB510d, complete sequence1e-20109BLASTN svgBLASTP svg
NC_008277:485299*48529951060325305Borrelia afzelii PKo, complete genome1e-20109BLASTN svgBLASTP svg
NC_008009:4421992*4421992444911527124Acidobacteria bacterium Ellin345, complete genome1e-20109BLASTN svgBLASTP svg
NC_011757:5742290*5742290578349941210Methylobacterium chloromethanicum CM4, complete genome2e-19105BLASTN svgBLASTP svg
NC_009667:1371924*1371924140112629203Ochrobactrum anthropi ATCC 49188 chromosome 1, complete sequence9e-19103BLASTN svgBLASTP svg
NC_012808:594000*59400061960225603Methylobacterium extorquens AM1, complete genome4e-18101BLASTN svgBLASTP svg
NC_001318:479709*47970950779828090Borrelia burgdorferi B31, complete genome4e-18101BLASTN svgBLASTP svg
NC_020209:45495634549563457659927037Pseudomonas poae RE*1-1-14, complete genome6e-1797.6BLASTN svgBLASTP svg
NC_012808:39729833972983399542222440Methylobacterium extorquens AM1, complete genome6e-1797.6BLASTN svgBLASTP svg
NC_010424:14657*146574330928653Candidatus Desulforudis audaxviator MP104C, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_011757:51027325102732513806935338Methylobacterium chloromethanicum CM4, complete genome9e-1693.7BLASTN svgBLASTP svg
NC_013851:31669693166969319361626648Allochromatium vinosum DSM 180 chromosome, complete genome9e-1693.7BLASTN svgBLASTP svg
NC_007519:27730002773000280551732518Desulfovibrio alaskensis G20 chromosome, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_014217:4597426*4597426462121223787Starkeya novella DSM 506 chromosome, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_012796:2683711*2683711270614022430Desulfovibrio magneticus RS-1, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_009439:79449879449881473720240Pseudomonas mendocina ymp, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_013093:1909305*1909305193716827864Actinosynnema mirum DSM 43827, complete genome5e-1487.7BLASTN svgBLASTP svg
NC_006177:835459*83545985883523377Symbiobacterium thermophilum IAM 14863, complete genome5e-1487.7BLASTN svgBLASTP svg
NC_008570:3777469*3777469380230024832Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_019940:38997938997941536425386Thioflavicoccus mobilis 8321 chromosome, complete genome8e-1383.8BLASTN svgBLASTP svg
NC_015740:34862263486226350909922874Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, complete8e-1383.8BLASTN svgBLASTP svg
NC_015514:33071993307199334464737449Cellulomonas fimi ATCC 484 chromosome, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_012808:1122341*1122341115920936869Methylobacterium extorquens AM1, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_009439:860571*86057188549124921Pseudomonas mendocina ymp, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_008752:46656994665699468808622388Acidovorax avenae subsp. citrulli AAC00-1, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_009664:4423829*44238294686013262185Kineococcus radiotolerans SRS30216, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_010172:798923*79892388030381381Methylobacterium extorquens PA1, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_011386:1727203*1727203175090123699Oligotropha carboxidovorans OM5, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_007005:40623114062311408347221162Pseudomonas syringae pv. syringae B728a, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_009937:5033152*5033152505948226331Azorhizobium caulinodans ORS 571, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_010673:479552*47955250738827837Borrelia hermsii DAH, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_010725:750911*75091177963428724Methylobacterium populi BJ001, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_013416:1429881*1429881145213822258Aggregatibacter actinomycetemcomitans D11S-1, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_015410:22588002258800228509926300Pseudomonas mendocina NK-01 chromosome, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_007435:2352954*2352954238639233439Burkholderia pseudomallei 1710b chromosome II, complete sequence2e-1075.8BLASTN svgBLASTP svg
NC_007519:3240864*3240864326641325550Desulfovibrio alaskensis G20 chromosome, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_007650:2429307*2429307246662437318Burkholderia thailandensis E264 chromosome II, complete sequence2e-1075.8BLASTN svgBLASTP svg
NC_008570:23650023650025959923100Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_009075:587441*58744162177434334Burkholderia pseudomallei 668 chromosome II, complete sequence2e-1075.8BLASTN svgBLASTP svg
NC_009078:510525*51052554399133467Burkholderia pseudomallei 1106a chromosome II, complete sequence2e-1075.8BLASTN svgBLASTP svg
NC_010622:23859322385932240909923168Burkholderia phymatum STM815 chromosome 1, complete sequence2e-1075.8BLASTN svgBLASTP svg
NC_012559:13019881301988132559923612Laribacter hongkongensis HLHK9, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_021182:93000*9300014465551656Clostridium pasteurianum BC1, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_002939:1480474*1480474150560725134Geobacter sulfurreducens PCA, complete genome8e-1073.8BLASTN svgBLASTP svg
NC_007519:1782067*1782067181840436338Desulfovibrio alaskensis G20 chromosome, complete genome8e-1073.8BLASTN svgBLASTP svg
NC_008060:1945597*1945597197248126885Burkholderia cenocepacia AU 1054 chromosome 1, complete sequence8e-1073.8BLASTN svgBLASTP svg
NC_008542:2631138*2631138265802226885Burkholderia cenocepacia HI2424 chromosome 1, complete sequence8e-1073.8BLASTN svgBLASTP svg
NC_010505:1205747*1205747122904923303Methylobacterium radiotolerans JCM 2831, complete genome8e-1073.8BLASTN svgBLASTP svg
NC_010505:40095040095042537624427Methylobacterium radiotolerans JCM 2831, complete genome8e-1073.8BLASTN svgBLASTP svg
NC_011769:2294387*2294387231565121265Desulfovibrio vulgaris str. 'Miyazaki F', complete genome8e-1073.8BLASTN svgBLASTP svg
NC_010804:25186952518695254148822794Burkholderia multivorans ATCC 17616 chromosome 1, complete3e-0971.9BLASTN svgBLASTP svg
NC_009664:570768*57076859843127664Kineococcus radiotolerans SRS30216, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_008027:29090002909000292988020881Pseudomonas entomophila L48, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_005085:24623246234912724505Chromobacterium violaceum ATCC 12472, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_005773:38514333851433386927817846Pseudomonas syringae pv. phaseolicola 1448A, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_007492:33328393332839335417921341Pseudomonas fluorescens PfO-1, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_008463:2654014*2654014267605522042Pseudomonas aeruginosa UCBPP-PA14, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_014541:29785002978500299617417675Ferrimonas balearica DSM 9799 chromosome, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_014932:1232346*1232346130968277337Bartonella clarridgeiae 73, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_008570:3083850*3083850310907525226Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_008435:39151103915110393809922990Rhodopseudomonas palustris BisA53, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_007643:15047581504758152909924342Rhodospirillum rubrum ATCC 11170, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_007508:2941889*2941889296435422466Xanthomonas campestris pv. vesicatoria str. 85-10, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_007005:31998203199820323980239983Pseudomonas syringae pv. syringae B728a, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_005955:173436*17343619910325668Bartonella quintana str. Toulouse, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_005773:32535753253575328174728173Pseudomonas syringae pv. phaseolicola 1448A, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_008751:29882352988235301490126667Desulfovibrio vulgaris subsp. vulgaris DP4, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_010501:25118872511887254627834392Pseudomonas putida W619, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_012660:3689223*3689223371658727365Pseudomonas fluorescens SBW25 chromosome, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_020209:2119845*2119845214457424730Pseudomonas poae RE*1-1-14, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_015424:4251369*4251369427627324905Aeromonas veronii B565 chromosome, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_015410:96952696952699007820553Pseudomonas mendocina NK-01 chromosome, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_015186:1504275*1504275153079626522Acidiphilium multivorum AIU301, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_015138:46665444666544468852321980Acidovorax avenae subsp. avenae ATCC 19860 chromosome, complete5e-0867.9BLASTN svgBLASTP svg
NC_014935:595685*59568561559919915Nitratifractor saLSUginis DSM 16511 chromosome, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_012660:5571500*5571500559959928100Pseudomonas fluorescens SBW25 chromosome, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_007626:10382141038214107309634883Magnetospirillum magneticum AMB-1, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_007644:3229*32292661523387Moorella thermoacetica ATCC 39073, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_008570:1852286*1852286187535523070Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_010514:600060002855022551Methylobacterium radiotolerans JCM 2831 plasmid pMRAD03, complete2e-0765.9BLASTN svgBLASTP svg
NC_013174:373726*37372639441720692Jonesia denitrificans DSM 20603, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_013855:558831*55883158109922269Azospirillum sp. B510 plasmid pAB510a, complete sequence2e-0765.9BLASTN svgBLASTP svg
NC_013855:670285*67028569312522841Azospirillum sp. B510 plasmid pAB510a, complete sequence2e-0765.9BLASTN svgBLASTP svg
NC_015733:26583372658337270338145045Pseudomonas putida S16 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_019815:114288*11428813709922812Candidatus Kinetoplastibacterium crithidii (ex Angomonas deanei2e-0765.9BLASTN svgBLASTP svg
NC_007626:40380544038054406859930546Magnetospirillum magneticum AMB-1, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_015161:162000*16200018601224013Deinococcus proteolyticus MRP chromosome, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_015379:27513422751342277455823217Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,8e-0763.9BLASTN svgBLASTP svg
NC_015740:26143172614317265004935733Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, complete8e-0763.9BLASTN svgBLASTP svg
NC_016026:21705002170500219248521986Micavibrio aeruginosavorus ARL-13 chromosome, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_003902:1858349*1858349191581657468Xanthomonas campestris pv. campestris str. ATCC 33913, complete3e-0661.9BLASTN svgBLASTP svg
NC_007005:10362431036243106363927397Pseudomonas syringae pv. syringae B728a, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_007492:20357612035761205955323793Pseudomonas fluorescens PfO-1, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_007493:1929000*1929000195414225143Rhodobacter sphaeroides 2.4.1 chromosome 1, complete sequence3e-0661.9BLASTN svgBLASTP svg
NC_009092:43376174337617437380536189Shewanella loihica PV-4, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_009937:43921084392108441736925262Azorhizobium caulinodans ORS 571, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_010338:1216385*1216385124125324869Caulobacter sp. K31, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_012489:1797032*1797032181538418353Gemmatimonas aurantiaca T-27, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_014006:12045001204500122366719168Sphingobium japonicum UT26S chromosome 1, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_014098:2225174*2225174227484649673Bacillus tusciae DSM 2912 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_014844:1270618*1270618132486354246Desulfovibrio aespoeensis Aspo-2 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_020209:19865031986503202425537753Pseudomonas poae RE*1-1-14, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_020260:603796*60379665197748182Cronobacter sakazakii Sp291, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_003888:3138905*3138905316269723793Streptomyces coelicolor A3(2), complete genome3e-0661.9BLASTN svgBLASTP svg