Pre_GI: BLASTP Hits

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Query: NC_017986:4885979:4888798 Pseudomonas putida ND6 chromosome, complete genome

Start: 4888798, End: 4889862, Length: 1065

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012660:3689223:370301937030193703990972Pseudomonas fluorescens SBW25 chromosome, complete genomeintegrase (pseudogene)9e-119426
NC_011770:860944:8639658639658650141050Pseudomonas aeruginosa LESB58, complete genomeIntegrase2e-107389
NC_011770:2690501:2690501269050126915261026Pseudomonas aeruginosa LESB58, complete genomesite-specific recombinase, phage integrase family2e-106386
NC_008027:2331617:2337757233775723388061050Pseudomonas entomophila L48, complete genomesite-specific recombinase, integrase family1e-102373
NC_002947:4484824:449569044956904496649960Pseudomonas putida KT2440, complete genomesite-specific recombinase, phage integrase family5e-99361
NC_017986:4931104:4946514494651449475211008Pseudomonas putida ND6 chromosome, complete genomephage integrase1e-97356
NC_007005:3414579:3419554341955434205881035Pseudomonas syringae pv. syringae B728a, complete genomePhage integrase:Phage integrase, N-terminal SAM-like7e-57221
NC_017033:1052000:1053148105314810541671020Frateuria aurantia DSM 6220 chromosome, complete genomesite-specific recombinase XerC2e-53210
NC_012724:359444:3687393687393697581020Burkholderia glumae BGR1 chromosome 1, complete genomePhage-related integrase1e-48194
NC_015942:403296:4159944159944170011008Acidithiobacillus ferrivorans SS3 chromosome, complete genomeintegrase family protein2e-40167
NC_010645:369408:4026334026334036671035Bordetella avium 197N, complete genomeintegrase9e-35147
NC_009053:553298:5572235572235582631041Actinobacillus pleuropneumoniae L20, complete genomepredicted phage integrase family protein2e-32139
NC_013446:4045000:4052312405231240533461035Comamonas testosteroni CNB-2, complete genomehypothetical protein3e-31135
NC_012724:359444:3783543783543793821029Burkholderia glumae BGR1 chromosome 1, complete genomePhage integrase:Phage integrase, N-terminal SAM-like protein3e-29129
NC_009656:2663387:266807926680792668627549Pseudomonas aeruginosa PA7 chromosome, complete genomephage integrase family protein1e-27124
NC_007005:1738500:174509817450981745496399Pseudomonas syringae pv. syringae B728a, complete genome3e-25116
NC_010508:451184:461527461527462063537Burkholderia cenocepacia MC0-3 chromosome 1, complete sequence8e-25114
NC_013446:2761000:277649127764912777219729Comamonas testosteroni CNB-2, complete genomehypothetical protein8e-21101
NC_009708:2537557:2555953255595325569691017Yersinia pseudotuberculosis IP 31758 chromosome, complete genomephage integrase family site specific recombinase3e-1996.7
NC_007712:2028500:2057823205782320588451023Sodalis glossinidius str. 'morsitans', complete genomeputative phage integrase2e-1894
NC_007712:1954808:1974024197402419750401017Sodalis glossinidius str. 'morsitans', complete genomephage integrase2e-1893.2
NC_016816:2953530:2977372297737229783941023Pantoea ananatis LMG 5342, complete genomesite-specific recombinase, phage integrase family2e-1790.1
NC_013132:7954000:7968218796821879694891272Chitinophaga pinensis DSM 2588, complete genomeintegrase family protein2e-1687
NC_020181:2097066:2117522211752221185741053Enterobacter aerogenes EA1509E, complete genomePutative integrase2e-1686.7
NC_011294:2053991:205795920579592058948990Salmonella enterica subsp. enterica serovar Enteritidis strphage integrase5e-1685.9
NC_011205:2180598:218594621859462186935990Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853integrase protein5e-1685.9
NC_007712:1926500:193080019308001931645846Sodalis glossinidius str. 'morsitans', complete genomeputative phage integrase5e-1685.5
NC_009656:2663387:266862426686242669106483Pseudomonas aeruginosa PA7 chromosome, complete genomephage integrase family protein1e-1584.3
NC_006155:2116834:2128303212830321293251023Yersinia pseudotuberculosis IP 32953, complete genomeputative integrase2e-1583.6
NC_012721:1052883:105740610574061057858453Burkholderia glumae BGR1 chromosome 2, complete genomePhage integrase family protein6e-1582
NC_007712:1712667:171266717126671713602936Sodalis glossinidius str. 'morsitans', complete genomeputative phage integrase2e-1480.5
CP002797:4812799:4826760482676048278061047Escherichia coli NA114, complete genomePutative integrase3e-1479.7
NC_012779:2127542:2148941214894121499511011Edwardsiella ictaluri 93-146, complete genomesite-specific recombinase, phage integrase family1e-1378.2
NC_005810:1663672:167309716730971673675579Yersinia pestis biovar Microtus str. 91001, complete genomeintegrase6e-1375.5
NC_008149:2517538:253577225357722536329558Yersinia pestis Nepal516, complete genomehypothetical protein1e-1273.9
NC_008150:1384102:139870513987051399262558Yersinia pestis Antiqua, complete genomehypothetical protein2e-1273.6
NC_016609:4233701:4271948427194842730391092Niastella koreensis GR20-10 chromosome, complete genomeintegrase family protein3e-1273.2
NC_011770:1431740:1433854143385414349571104Pseudomonas aeruginosa LESB58, complete genomephage integrase, putative4e-1272.8
NC_009381:1414985:142000214200021420559558Yersinia pestis Pestoides F chromosome, complete genomehypothetical protein4e-1272.4
NC_017265:2306500:232086923208692321384516Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,Integrase5e-1272
NC_017168:3535786:354487235448723545387516Yersinia pestis A1122 chromosome, complete genomehypothetical protein5e-1272
NC_003143:2101902:211562621156262116141516Yersinia pestis CO92, complete genomehypothetical protein5e-1272
NC_014355:288000:2962442962442972841041Candidatus Nitrospira defluvii, complete genomeputative phage integrase3e-1169.7
NC_013364:2898964:2916736291673629178061071Escherichia coli O111:H- str. 11128, complete genomeputative integrase4e-1169.3
NC_015422:910292:9166939166939177841092Alicycliphilus denitrificans K601 chromosome, complete genomeintegrase family protein3e-1066.6
NC_011601:1039500:1043517104351710445901074Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomeintegrase7e-1065.1
NC_011601:717072:7208917208917219611071Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomeintegrase3e-0963.2
NC_012967:786534:7879527879527890221071Escherichia coli B str. REL606 chromosome, complete genomeintegrase3e-0963.2
NC_013941:975353:9807899807899818591071Escherichia coli O55:H7 str. CB9615 chromosome, complete genomephage integrase family3e-0963.2
NC_014722:846084:8501788501788513681191Burkholderia rhizoxinica HKI 454, complete genomehypothetical protein4e-0962.8
NC_015580:141379:1621711621711633671197Novosphingobium sp. PP1Y, complete genomephage integrase4e-0962.8
NC_013943:2705983:2705983270598327071761194Denitrovibrio acetiphilus DSM 12809 chromosome, complete genomeintegrase family protein6e-0962
NC_011770:2499432:2540392254039225415041113Pseudomonas aeruginosa LESB58, complete genomephage integrase, putative9e-0961.2
NC_015379:6226661:6232535623253562336681134Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,putative phage integrase1e-0860.8
NC_010682:3313944:3349996334999633510511056Ralstonia pickettii 12J chromosome 1, complete sequenceintegrase family protein1e-0860.8
NC_012856:3000839:3011439301143930124941056Ralstonia pickettii 12D chromosome 1, complete genomeintegrase family protein5e-0859.3
NC_012947:3015985:302838230283823029305924Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completelambda integrase4e-0859.3
NC_015381:429940:4389684389684400111044Burkholderia gladioli BSR3 chromosome 1, complete sequencephage integrase5e-0858.9
NC_007434:1809946:1853156185315618541751020Burkholderia pseudomallei 1710b chromosome I, complete sequenceprobable site-specific6e-0858.9
NC_008313:2685531:2688767268876726898131047Ralstonia eutropha H16 chromosome 1, complete sequencephage integrase family protein6e-0858.5
NC_014355:243543:2579012579012590221122Candidatus Nitrospira defluvii, complete genomephage integrase1e-0758.2
NC_008782:841134:851174851174852145972Acidovorax sp. JS42, complete genomephage integrase family protein2e-0757.4
NC_004578:568236:5847805847805860211242Pseudomonas syringae pv. tomato str. DC3000, complete genomesite-specific recombinase, phage integrase family2e-0757
NC_008542:483761:4912204912204922631044Burkholderia cenocepacia HI2424 chromosome 1, complete sequencephage integrase family protein2e-0757
NC_008060:2913671:2934382293438229354251044Burkholderia cenocepacia AU 1054 chromosome 1, complete sequencephage integrase2e-0757
NC_014722:771483:788089788089788976888Burkholderia rhizoxinica HKI 454, complete genomeDNA integration/recombination/inversion protein2e-0757
NC_014972:480355:4934964934964946591164Desulfobulbus propionicus DSM 2032 chromosome, complete genomeintegrase family protein6e-0755.5
NC_015684:362236:3848903848903859091020Oligotropha carboxidovorans OM5 chromosome, complete genomeshufflon-specific DNA recombinase6e-0755.5
NC_008380:4968492:497566649756664976619954Rhizobium leguminosarum bv. viciae 3841, complete genomeputative shufflon-specific DNA recombinase1e-0654.3
NC_015458:2338437:2340983234098323420711089Pusillimonas sp. T7-7 chromosome, complete genomesite-specific recombinase, phage integrase family3e-0653.1
NC_013508:1687432:1700197170019717012911095Edwardsiella tarda EIB202, complete genomeputative phage integrase protein5e-0652.4
NC_012779:1966205:1973860197386019749541095Edwardsiella ictaluri 93-146, complete genomeintegrase5e-0652.4
NC_008702:2039462:2046178204617820472541077Azoarcus sp. BH72, complete genomesite-specific recombinase, phage integrase family6e-0652
NC_010084:534937:541878541878542864987Burkholderia multivorans ATCC 17616 chromosome 1, completeintegrase family protein9e-0651.6