Pre_GI Gene

Some Help

Host: NC_006155 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_006155:2116834 Yersinia pseudotuberculosis IP 32953, complete genome

Host Lineage: Yersinia pseudotuberculosis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain is a fully virulent serotype I strain isolated from a human patient. Environmental bacterium that causes gastrointestinal disease. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. This organism was first isolated in 1883 by Malassez and Vignal and is termed pseudotuberculosis since it causes lesions in the lung that are similar to those observed during tuberculosis infection. It is ubiquitous in the environment and is a food and waterborne pathogen that affects animals as well as humans by causing gastroenteritis like Yersinia enterocolitica.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
21160732116837765putative W protein Enterobacteria phage 186 gbAAC341471QuickGO ontologyBLASTP
211683421178711038capsid portal protein Enterobacteria phage 186 gbAACQuickGO ontologyBLASTP
21186232118982360putative gp46 Bacteriophage N15 pirT13133 protein gp46-QuickGO ontologyBLASTP
211900521212872283putative phage P2 replication proteinQuickGO ontologyBLASTP
21212742121546273hypothetical proteinBLASTP
21216122121923312similar to gpB bacteriophage P2QuickGO ontologyBLASTP
21221302122639510regulatory protein CII bacteriophage 186QuickGO ontologyBLASTP
21226942122891198putative regulator for prophage CP-933T Escherichia coli O157H7QuickGO ontologyBLASTP
21229622123573612CI repressor of phage 186 and othersQuickGO ontologyBLASTP
212360121248721272hypothetical proteinBLASTP
21248722125750879hypothetical proteinBLASTP
212587021269251056putative integraseQuickGO ontologyBLASTP
212692221279681047hypothetical proteinBLASTP
212830321293251023putative integraseQuickGO ontologyBLASTP
21296452130148504hypothetical protein
21302422130580339hypothetical protein
21307122131575864hypothetical proteinBLASTP
21319342132170237hypothetical protein
21324072132835429hypothetical proteinBLASTP
213283221339711140hypothetical protein
213401621356201605hypothetical proteinBLASTP
21356072136449843hypothetical proteinBLASTP
21367502137088339hypothetical protein
21370922137598507hypothetical proteinBLASTP
21384632138732270hypothetical proteinBLASTP
21388172139062246hypothetical protein