Pre_GI: BLASTP Hits

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Query: NC_016830:4809210:4814338 Pseudomonas fluorescens F113 chromosome, complete genome

Start: 4814338, End: 4815141, Length: 804

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants. Furthermore a number of strains also posses the ability to suppress agricultural pathogens like fungal infections, hence their role as biocontrol (biological disease control) agents is under examination. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010515:1618093:162272416227241623533810Burkholderia cenocepacia MC0-3 chromosome 2, complete sequenceDiaminopimelate epimerase2e-98358
NC_008543:2696377:271269127126912713500810Burkholderia cenocepacia HI2424 chromosome 2, complete sequenceDiaminopimelate epimerase1e-95349
NC_008061:2548849:255348825534882554297810Burkholderia cenocepacia AU 1054 chromosome 2, complete sequenceDiaminopimelate epimerase1e-95349
NC_005295:21995:422524225243049798Ehrlichia ruminantium str. Welgevonden, complete genomediaminopimelate epimerase3e-44178
NC_013959:156991:159865159865160695831Sideroxydans lithotrophicus ES-1 chromosome, complete genomediaminopimelate epimerase6e-43174
NC_015380:412277:414824414824415615792Candidatus Pelagibacter sp. IMCC9063 chromosome, complete genomediaminopimelate epimerase6e-41167
NC_009437:1481064:148245114824511483287837Caldicellulosiruptor saccharolyticus DSM 8903, complete genomediaminopimelate epimerase7e-38157
NC_002947:5961096:596231559623155963178864Pseudomonas putida KT2440, complete genomediaminopimelate epimerase6e-37154
NC_014909:662500:663820663820664653834Candidatus Blochmannia vafer str. BVAF chromosome, complete genomediaminopimelate epimerase1e-36153
NC_007712:4023516:402421440242144025038825Sodalis glossinidius str. 'morsitans', complete genomediaminopimelate epimerase2e-36152
NC_011901:39215:443764437645212837Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, completeDiaminopimelate epimerase4e-36151
NC_020209:4549563:455081445508144551644831Pseudomonas poae RE*1-1-14, complete genomediaminopimelate epimerase2e-35149
NC_007516:1283210:1285667128566712867731107Synechococcus sp. CC9605, complete genomediaminopimelate epimerase1e-33143
NC_016641:5306000:530607653060765306909834Paenibacillus terrae HPL-003 chromosome, complete genomediaminopimelate epimerase1e-32140
NC_016830:6589575:659082765908276591657831Pseudomonas fluorescens F113 chromosome, complete genomeprotein DapF2e-32139
NC_005061:647567:649651649651650481831Candidatus Blochmannia floridanus, complete genomediaminopimelate epimerase1e-31136
NC_009012:3653111:365655036565503657392843Clostridium thermocellum ATCC 27405, complete genomeDiaminopimelate epimerase2e-31136
NC_011565:1054414:105718210571821058009828Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2,diaminopimelate epimerase4e-31134
NC_003228:3085793:310488631048863105704819Bacteroides fragilis NCTC 9343, complete genomediaminopimelate epimerase5e-30131
NC_011658:4672000:469333146933314694197867Bacillus cereus AH187 chromosome, complete genomediaminopimelate epimerase1e-29130
NC_014541:4167916:416791641679164168725810Ferrimonas balearica DSM 9799 chromosome, complete genomediaminopimelate epimerase3e-29129
NC_020134:845164:8620598620598661054047Clostridium stercorarium subsp. stercorarium DSM 8532, completecarbamoyl-phosphate synthase large chain2e-29129
NC_015164:3144745:315291831529183153718801Bacteroides salanitronis DSM 18170 chromosome, complete genomeDiaminopimelate epimerase2e-29129
NC_009614:4918877:493370049337004934542843Bacteroides vulgatus ATCC 8482 chromosome, complete genomediaminopimelate epimerase2e-29129
NC_016077:8545:214002140022329930Acidaminococcus intestini RyC-MR95 chromosome, complete genomediaminopimelate epimerase1e-29129
NC_014538:1125000:114613411461341146958825Thermoanaerobacter sp. X513 chromosome, complete genomediaminopimelate epimerase2e-28125
NC_014933:2525393:253782225378222538667846Bacteroides helcogenes P 36-108 chromosome, complete genomediaminopimelate epimerase7e-28124
NC_009512:3118907:312729831272983128104807Pseudomonas putida F1, complete genomeDiaminopimelate epimerase5e-28124
NC_017986:5421000:542804054280405428846807Pseudomonas putida ND6 chromosome, complete genomediaminopimelate epimerase5e-28124
NC_012225:1071159:107274910727491073588840Brachyspira hyodysenteriae WA1, complete genomeDiaminopimelate epimerase2e-27123
NC_010730:180000:186950186950187810861Sulfurihydrogenibium sp. YO3AOP1, complete genomeDiaminopimelate epimerase6e-27121
NC_016584:2244966:226601522660152266866852Desulfosporosinus orientis DSM 765 chromosome, complete genomediaminopimelate epimerase2e-26119
NC_014209:1363151:136315113631511363975825Thermoanaerobacter mathranii subsp. mathranii str. A3 chromosome,diaminopimelate epimerase2e-26119
NC_021182:401129:418550418550419419870Clostridium pasteurianum BC1, complete genomediaminopimelate epimerase4e-26118
NC_015555:1450704:145070414507041451537834Thermoanaerobacterium xylanolyticum LX-11 chromosome, completeDiaminopimelate epimerase1e-24113
NC_003103:563961:564933564933565745813Rickettsia conorii str. Malish 7, complete genomediaminopimelate epimerase4e-24111
NC_017044:564000:569723569723570535813Rickettsia parkeri str. Portsmouth chromosome, complete genomediaminopimelate epimerase6e-24111
NC_017062:508500:511489511489512301813Rickettsia typhi str. B9991CWPP chromosome, complete genomediaminopimelate epimerase1e-23110
NC_014122:205112:215168215168216016849Methanocaldococcus infernus ME chromosome, complete genomediaminopimelate epimerase2e-23109
NC_017058:862000:875845875845876657813Rickettsia australis str. Cutlack chromosome, complete genomediaminopimelate epimerase2e-23109
NC_010263:563814:569261569261570073813Rickettsia rickettsii str. Iowa, complete genomediaminopimelate epimerase5e-23108
NC_009882:563830:569277569277570089813Rickettsia rickettsii str. 'Sheila Smith', complete genomediaminopimelate epimerase5e-23108
NC_016908:563747:569194569194570006813Rickettsia rickettsii str. Colombia chromosome, complete genomediaminopimelate epimerase5e-23108
NC_016909:563727:569174569174569986813Rickettsia rickettsii str. Arizona chromosome, complete genomediaminopimelate epimerase5e-23108
NC_016911:563822:569269569269570081813Rickettsia rickettsii str. Hauke chromosome, complete genomediaminopimelate epimerase5e-23108
NC_016914:563941:569388569388570200813Rickettsia rickettsii str. Hino chromosome, complete genomediaminopimelate epimerase5e-23108
NC_019970:1457794:146377214637721464605834Thermoanaerobacterium thermosaccharolyticum M0795, complete genomediaminopimelate epimerase1e-22107
NC_000963:506500:510023510023510835813Rickettsia prowazekii str. Madrid E, complete genomediaminopimelate epimerase8e-23107
NC_017049:505000:508140508140508952813Rickettsia prowazekii str. Chernikova chromosome, complete genomediaminopimelate epimerase8e-23107
NC_017050:506500:510026510026510838813Rickettsia prowazekii str. Katsinyian chromosome, complete genomediaminopimelate epimerase8e-23107
NC_017051:505000:508150508150508962813Rickettsia prowazekii str. Dachau chromosome, complete genomediaminopimelate epimerase8e-23107
NC_017056:506500:510005510005510817813Rickettsia prowazekii str. BuV67-CWPP chromosome, complete genomediaminopimelate epimerase8e-23107
NC_017048:849000:852162852162852974813Rickettsia prowazekii str. GvV257 chromosome, complete genomediaminopimelate epimerase2e-22106
NC_017057:507500:510227510227511039813Rickettsia prowazekii str. RpGvF24 chromosome, complete genomediaminopimelate epimerase2e-22106
NC_014410:1527405:152832115283211529154834Thermoanaerobacterium thermosaccharolyticum DSM 571 chromosome,diaminopimelate epimerase1e-22106
NC_007759:2179000:219447421944742195361888Syntrophus aciditrophicus SB, complete genomediaminopimelate epimerase3e-22105
NC_009881:562000:566521566521567333813Rickettsia akari str. Hartford, complete genomediaminopimelate epimerase4e-22105
NC_014479:3079855:309464530946453095499855Bacillus subtilis subsp. spizizenii str. W23 chromosome, completediaminopimelate epimerase4e-22105
NC_009879:670169:682625682625683434810Rickettsia canadensis str. McKiel, complete genomediaminopimelate epimerase7e-22104
NC_003366:2106937:211653321165332117351819Clostridium perfringens str. 13, complete genomediaminopimelate epimerase6e-22104
NC_016929:657451:672055672055672864810Rickettsia canadensis str. CA410 chromosome, complete genomediaminopimelate epimerase2e-21102
NC_013887:17160:378373783738724888Methanocaldococcus sp. FS406-22 chromosome, complete genomediaminopimelate epimerase1e-20100
NC_020209:397376:438844438844439668825Pseudomonas poae RE*1-1-14, complete genomediaminopimelate epimerase5e-2098.2
NS_000191:923949:941297941297942121825Uncultured Termite group 1 bacterium phylotype Rs-D17, completediaminopimelate epimerase6e-1994.7
NC_020419:923949:941297941297942121825Uncultured Termite group 1 bacterium phylotype Rs-D17 DNA, completediaminopimelate epimerase6e-1994.7
NC_013665:849508:850918850918851757840Methanocella paludicola SANAE, complete genomediaminopimelate epimerase3e-1892.4
NC_014253:431942:477202477202478032831Methanohalobium evestigatum Z-7303 chromosome, complete genomediaminopimelate epimerase2e-1686.7
NC_013943:2610902:262226026222602623072813Denitrovibrio acetiphilus DSM 12809 chromosome, complete genomediaminopimelate epimerase2e-1686.7
NC_015318:249445:269659269659270492834Hippea maritima DSM 10411 chromosome, complete genomeDiaminopimelate epimerase9e-1684.3
NC_016884:641000:650811650811651611801Sulfobacillus acidophilus DSM 10332 chromosome, complete genomediaminopimelate epimerase1e-1584
NC_013939:212331:217130217130217945816Deferribacter desulfuricans SSM1, complete genomediaminopimelate epimerase3e-1582.4
NC_014222:1045281:106738010673801068336957Methanococcus voltae A3 chromosome, complete genomediaminopimelate epimerase2e-1479.7
NC_002937:1915787:193252019325201933368849Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, completediaminopimelate epimerase9e-1477.4
NC_013894:1194458:120558612055861206422837Thermocrinis albus DSM 14484 chromosome, complete genomediaminopimelate epimerase3e-1375.9
NC_014836:33278:501835018351052870Desulfurispirillum indicum S5 chromosome, complete genomediaminopimelate epimerase7e-1374.3
NC_014759:2099623:211283021128302113609780Marivirga tractuosa DSM 4126 chromosome, complete genomediaminopimelate epimerase2e-1273.2
NC_017300:1358260:135737013573701358263894Corynebacterium pseudotuberculosis 1002 chromosome, completediaminopimelate epimerase2e-1273.2
NC_017301:1360565:135967513596751360568894Corynebacterium pseudotuberculosis C231 chromosome, completediaminopimelate epimerase2e-1273.2
NC_010118:207843:226860226860227645786Candidatus Sulcia muelleri GWSS, complete genomediaminopimelate epimerase4e-1272
NC_002491:585807:600221600221600994774Chlamydophila pneumoniae J138, complete genomediaminopimelate epimerase2e-1169.7
NC_002179:237854:239911239911240684774Chlamydophila pneumoniae AR39, complete genomediaminopimelate epimerase2e-1169.7
NC_012039:53497:540895408954838750Campylobacter lari RM2100, complete genomediaminopimelate epimerase2e-0963.2
NC_008526:74500:9444894448954551008Lactobacillus casei ATCC 334, complete genomeDiaminopimelate epimerase5e-0961.6
NC_014334:99000:1007731007731017801008Lactobacillus casei str. Zhang chromosome, complete genomediaminopimelate epimerase2e-0859.7
NC_007760:645016:663416663416664216801Anaeromyxobacter dehalogenans 2CP-C, complete genomediaminopimelate epimerase7e-0754.7
NC_004552:235769:242986242986243768783Chlamydophila abortus S26/3, complete genomediaminopimelate epimerase3e-0652.8