Pre_GI Gene

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Host: NC_002947 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_002947:5961096 Pseudomonas putida KT2440, complete genome

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain was derived from a toluene-degrading isolate, Pseudomonas arvilla strain mt-2 (renamed Pseudomonas putida mt-2), by loss of its plasmid. Common environmental bacterium. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
596109659623431248diaminopimelate decarboxylaseQuickGO ontologyBLASTP
59623155963178864diaminopimelate epimeraseQuickGO ontologyBLASTP
59631925963902711hypothetical proteinBLASTP
59639025964801900tyrosine recombinaseQuickGO ontologyBLASTP
59647985965493696hydrolase haloacid dehalogenase-like familyQuickGO ontologyBLASTP
59655935965922330hypothetical proteinBLASTP
596635259676831332ammonium transporterQuickGO ontologyBLASTP
59677305968068339nitrogen regulatory protein P-IIQuickGO ontologyBLASTP
59685875968853267hypothetical proteinBLASTP
596916159712842124hypothetical proteinBLASTP
59714935971633141hypothetical proteinBLASTP
59722055972693489hypothetical proteinBLASTP
597619159776811491magnesium chelatase subunit DI familyQuickGO ontologyBLASTP
59777505978118369response regulatorQuickGO ontologyBLASTP
59781155979107993DNA-binding response regulator LuxR familyQuickGO ontologyBLASTP
597934759843955049sensor histidine kinaseGAF domain proteinQuickGO ontologyBLASTP