Pre_GI Gene

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Host: NC_017044 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_017044:564000 Rickettsia parkeri str. Portsmouth chromosome, complete genome

Host Lineage: Rickettsia parkeri; Rickettsia; Rickettsiaceae; Rickettsiales; Proteobacteria; Bacteria

General Information: Animal pathogen in Mammalia (intracellular obligate). Rickettsiae are obligate intracellular Gram-negative bacteria mostly found in arthropods, some of which cause mild to severe diseases in humans. Rickettsia parkeri, a member of the spotted fever group Rickettsia (SFGR), was first isolated from the Gulf Coast tick, Amblyomma maculatum, in 1937. In 2004, the first confirmed human infection with R. parkeri was reported in a 40-year-old man from the Tidewater area of coastal Virginia. The agent was isolated in cell culture from an eschar biopsy specimen and designated the Portsmouth strain; recently, the first recognized case of tick bite-associated human infection was described.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
564181564696516RND family efflux transporterQuickGO ontologyBLASTP
564789565007219RND efflux transporterQuickGO ontologyBLASTP
56506256515796RND family efflux transporterQuickGO ontologyBLASTP
566141566359219hypothetical proteinBLASTP
5677325687481017GlycosyltransferaseQuickGO ontologyBLASTP
569440569634195hypothetical proteinBLASTP
569723570535813diaminopimelate epimeraseQuickGO ontologyBLASTP
5705105717751266tRNA 2-methylthioadenosine synthase-like proteinQuickGO ontologyBLASTP
5720165730651050phenylalanyl-tRNA synthetase subunit alphaQuickGO ontologyBLASTP
5730625755182457phenylalanyl-tRNA synthetase subunit betaQuickGO ontologyBLASTP
5755235766621140DNA polymerase III subunit betaQuickGO ontologyBLASTP
576668576790123hypothetical proteinBLASTP
576756576860105DnaJ family molecular chaperoneQuickGO ontologyBLASTP
577023577526504hypothetical proteinBLASTP
5776545801612508leucyl-tRNA synthetaseQuickGO ontologyBLASTP
580681580815135hypothetical proteinBLASTP
580862581008147hypothetical protein
581248581859612Ribonuclease DQuickGO ontologyBLASTP
582010582315306septum formation initiatorQuickGO ontologyBLASTP
582296583006711phosphatidate cytidylyltransferaseQuickGO ontologyBLASTP
582966583646681undecaprenyl pyrophosphate synthetaseQuickGO ontologyBLASTP
5838195852491431osmolarity sensor protein EnvZQuickGO ontologyBLASTP
585233585913681PetRQuickGO ontologyBLASTP