Pre_GI: BLASTP Hits

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Query: NC_016822:1818897:1822900 Shigella sonnei 53G, complete genome

Start: 1822900, End: 1823487, Length: 588

Host Lineage: Shigella sonnei; Shigella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This genus is named for the Japanese scientist (Shiga) who first discovered these organisms in the 1890s. They are closely related to the Escherichia group, and may be considered the same species. These organisms are human-specific pathogens that are transmitted via contaminated food and water and are the leading causes of endemic bacillary dysentery, causing over 160 million cases of infection and 1 million deaths yearly worldwide. The bacteria infect the epithelial lining of the colon, causing acute inflammation by entering the host cell cytoplasm and spreading intercellularly. are extremely virulent organisms that can cause an active infection after a very low exposure. Both the type III secretion system, which delivers effector molecules into the host cell, and some of the translocated effectors such as the invasion plasmid antigens (Ipas), are encoded on the plasmid. The bacterium produces a surface protein that localizes to one pole of the cell (IcsA) which binds to and promotes actin polymerization, resulting in movement of the bacterium through the cell cytoplasm, and eventually to neighboring cells, which results in inflammatory destruction of the mucosal lining. This organism is the leading cause of dysentery in industrialized countries. The disease is usually less severe than other types of Shigella, causing mild diarrhea and dehydration.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_002655:2015000:2016603201660320196503048Escherichia coli O157:H7 EDL933, complete genomeformate dehydrogenase-N, nitrate-inducible, alpha subunit [Escherichia coli]5e-114409
NC_007384:1737885:1741118174111817441653048Shigella sonnei Ss046, complete genomeformate dehydrogenase-N, nitrate-inducible, alpha subunit5e-114409
NC_011750:1809943:1824581182458118276283048Escherichia coli IAI39 chromosome, complete genomeformate dehydrogenase-N subunit alpha, nitrate-inducible1e-113408
NC_010498:1700447:1701344170134417043913048Escherichia coli SMS-3-5, complete genomeformate dehydrogenase, nitrate inducible, alpha subunit, selenocysteine-containing1e-113408
NC_008258:1784637:1786180178618017892273048Shigella flexneri 5 str. 8401, complete genomeformate dehydrogenase-N, nitrate-inducible, alpha subunit2e-113407
NC_004741:1823000:1824579182457918276263048Shigella flexneri 2a str. 2457T, complete genomeformate dehydrogenase-N, nitrate-inducible, alpha subunit2e-113407
NC_011353:1971145:198342319834231984010588Escherichia coli O157:H7 str. EC4115 chromosome, complete genome2e-113407
NC_002695:2056545:206882320688232069410588Escherichia coli O157:H7 str. Sakai, complete genomehypothetical protein2e-113407
NC_010067:3538169:3556683355668335597333051Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, complete4e-95347
NC_012912:2998511:3019863301986330229103048Dickeya zeae Ech1591, complete genomeformate dehydrogenase, alpha subunit3e-90330
NC_015968:2110175:2120452212045221235053054Enterobacter asburiae LF7a chromosome, complete genomeformate dehydrogenase subunit alpha1e-85315
NC_012559:768939:771408771408771995588Laribacter hongkongensis HLHK9, complete genomeFormate dehydrogenase-O, major subunit1e-81301
NC_004347:103967:108703108703109284582Shewanella oneidensis MR-1, complete genomeformate dehydrogenase-N, nitrate-inducible, alpha subunit7e-77286
NC_014118:2316000:233797523379752338565591Burkholderia sp. CCGE1002 chromosome chromosome 2, completemolybdopterin oxidoreductase Fe4S4 region2e-76284
NC_015723:1486000:1533231153323115363833153Cupriavidus necator N-1 chromosome 2, complete sequenceformate dehydrogenase subunit alpha2e-75281
NC_008027:558507:576748576748577338591Pseudomonas entomophila L48, complete genomeformate dehydrogenase-O, major subunit2e-71268
NC_010322:583842:607390607390607980591Pseudomonas putida GB-1 chromosome, complete genomemolybdopterin oxidoreductase Fe4S4 region1e-69261
NC_015499:1167932:1173693117369311766892997Thermodesulfobium narugense DSM 14796 chromosome, complete genomeformate dehydrogenase, alpha subunit9e-31132
NC_015499:1167932:118177511817751182335561Thermodesulfobium narugense DSM 14796 chromosome, complete genomemolybdopterin oxidoreductase Fe4S4 region9e-29126
NC_014314:404315:4134404134404164393000Dehalogenimonas lykanthroporepellens BL-DC-9 chromosome, completeformate dehydrogenase subunit alpha3e-24111
NC_017187:1424371:143446214344621435007546Arcobacter butzleri ED-1, complete genometruncated formate dehydrogenase alpha subunit9e-1890.1
NC_005090:1082213:1100292110029211031112820Wolinella succinogenes DSM 1740, complete genomeFORMATE DEHYDROGENASE LARGE SUBUNIT PRECURSOR9e-1786.7
NC_000916:1417981:1417981141798114205782598Methanothermobacter thermautotrophicus str. Delta H, completeformate dehydrogenase, alpha subunit homolog2e-1375.9
NC_006138:3355028:3375583337558333784232841Desulfotalea psychrophila LSv54, complete genomeformate dehydrogenase, chain A2e-1272
NC_009515:1409912:1428988142898814310962109Methanobrevibacter smithii ATCC 35061, complete genomeformate dehydrogenase, alpha subunit, FdhA2e-1272
NC_015474:1794879:1804735180473518067201986Pyrococcus sp. NA2 chromosome, complete genomeformate dehydrogenase alpha subunit related protein4e-1271.2
NC_013741:565389:5712745712745741442871Archaeoglobus profundus DSM 5631, complete genomemolybdopterin oxidoreductase4e-1271.2
NC_009376:832000:8434468434468469523507Pyrobaculum arsenaticum DSM 13514 chromosome, complete genomemolybdopterin oxidoreductase8e-1270.1
NC_003106:91339:1035641035641064852922Sulfolobus tokodaii str. 7, complete genomehypothetical formate dehydrogenase alpha subunit1e-1169.7
NC_010505:3376322:3380193338019333831352943Methylobacterium radiotolerans JCM 2831, complete genomemolybdopterin oxidoreductase1e-1169.3
NC_014541:1996811:1999529199952920036294101Ferrimonas balearica DSM 9799 chromosome, complete genomeformate dehydrogenase, alpha subunit2e-1169.3
NC_017506:3825148:3829865382986538319762112Marinobacter adhaerens HP15 chromosome, complete genomehypothetical protein2e-1168.9
NC_012623:231603:2526082526082555472940Sulfolobus islandicus Y.N.15.51 chromosome, complete genomeformate dehydrogenase subunit alpha2e-1168.9
NC_012726:2287880:2287880228788022908192940Sulfolobus islandicus M.16.4 chromosome, complete genomeformate dehydrogenase subunit alpha3e-1168.6
NC_013859:421500:4342054342054368442640Azospirillum sp. B510 plasmid pAB510e, complete sequencenitrate reductase catalytic subunit3e-1168.6
NC_012588:2297497:2297497229749723004362940Sulfolobus islandicus M.14.25 chromosome, complete genomeformate dehydrogenase subunit alpha3e-1168.6
NC_012632:2390831:2390831239083123937702940Sulfolobus islandicus M.16.27 chromosome, complete genomeformate dehydrogenase subunit alpha3e-1168.6
NC_013769:2405248:2405248240524824081872940Sulfolobus islandicus L.D.8.5 chromosome, complete genomeformate dehydrogenase subunit alpha3e-1168.6
NC_017275:2327479:2329948232994823328872940Sulfolobus islandicus HVE10/4 chromosome, complete genomeformate dehydrogenase subunit alpha2e-1168.6
NC_012632:1212780:1217732121773212197051974Sulfolobus islandicus M.16.27 chromosome, complete genomeformate dehydrogenase subunit alpha2e-1168.6
NC_007517:2515870:2519197251919725218722676Geobacter metallireducens GS-15, complete genomeMolybdopterin oxidoreductase3e-1168.2
NC_021171:4425050:4431869443186944339232055Bacillus sp. 1NLA3E, complete genometrimethylamine-N-oxide reductase (cytochrome c)3e-1168.2
NC_015216:2548057:2558485255848525611902706Methanobacterium sp. AL-21 chromosome, complete genomeformate dehydrogenase subunit alpha4e-1167.8
NC_017276:2283933:2300214230021423031532940Sulfolobus islandicus REY15A chromosome, complete genomeformate dehydrogenase subunit alpha5e-1167.8
NC_014314:212579:2125792125792152392661Dehalogenimonas lykanthroporepellens BL-DC-9 chromosome, completeformate dehydrogenase subunit alpha5e-1167.4
NC_010814:1441327:1488489148848914906782190Geobacter lovleyi SZ, complete genomemolybdopterin oxidoreductase8e-1167
NC_011830:3369282:3370593337059333726622070Desulfitobacterium hafniense DCB-2, complete genomemolybdopterin oxidoreductase2e-1065.5
NC_006270:2657726:2657726265772626606652940Bacillus licheniformis ATCC 14580, complete genomeFormate dehydrogenase, alpha subunit YrhE2e-1065.5
NC_006322:2658587:2658587265858726615262940Bacillus licheniformis ATCC 14580, complete genomeYrhE2e-1065.5
NC_014219:2284000:2298295229829523003492055Bacillus selenitireducens MLS10 chromosome, complete genomeformate dehydrogenase, alpha subunit2e-1065.5
NC_013967:827150:8477008477008497422043Haloferax volcanii DS2 chromosome, complete genomeformate dehydrogenase alpha subunit3e-1065.1
NC_021184:1125000:1142623114262311451272505Desulfotomaculum gibsoniae DSM 7213, complete genomeanaerobic dehydrogenase, typically selenocysteine-containing4e-1064.3
NC_009943:970901:9856069856069867361131Candidatus Desulfococcus oleovorans Hxd3, complete genomemolybdopterin oxidoreductase Fe4S4 region4e-1064.3
NC_007907:3872805:3872805387280538744421638Desulfitobacterium hafniense Y51, complete genomeputative anaerobic dehydrogenase5e-1063.9
NC_013959:156991:1765171765171791652649Sideroxydans lithotrophicus ES-1 chromosome, complete genomemolybdopterin oxidoreductase7e-1063.9
NC_015065:162317:2033882033882064053018Acidobacterium sp. MP5ACTX9 plasmid pACIX902, complete sequenceformate dehydrogenase, alpha subunit1e-0962.8
NC_009943:1262000:1270566127056612727192154Candidatus Desulfococcus oleovorans Hxd3, complete genomemolybdopterin oxidoreductase1e-0962.8
NC_018870:115982:1215521215521237502199Thermacetogenium phaeum DSM 12270 chromosome, complete genomethiosulfate reductase PhsA2e-0962.4
NC_006322:2173500:2180124218012421831563033Bacillus licheniformis ATCC 14580, complete genomeYjgC2e-0962.4
NC_021184:3841172:3868981386898138710592079Desulfotomaculum gibsoniae DSM 7213, complete genomeanaerobic dehydrogenase, typically selenocysteine-containing2e-0962
NC_016884:813000:8347848347848377412958Sulfobacillus acidophilus DSM 10332 chromosome, complete genomeformate dehydrogenase subunit alpha2e-0962
NC_015680:841783:8628868628868648021917Pyrococcus yayanosii CH1 chromosome, complete genomemolybdopterin oxidoreductase, molybdopterin-binding subunit2e-0962
NC_006270:2172693:2179278217927821815722295Bacillus licheniformis ATCC 14580, complete genomeFormate dehydrogenase, alpha subunit3e-0961.6
NC_018870:115982:1159821159821181682187Thermacetogenium phaeum DSM 12270 chromosome, complete genomethiosulfate reductase PhsA3e-0961.6
NC_014639:725577:7454007454007483542955Bacillus atrophaeus 1942 chromosome, complete genomeiron-sulfur binding domain-containing protein3e-0961.6
CP002207:725577:7454007454007483542955Bacillus atrophaeus 1942, complete genomeiron-sulfur binding domain-containing protein3e-0961.6
NC_009328:1651812:1664104166410416661432040Geobacillus thermodenitrificans NG80-2 chromosome, complete genomeformate dehydrogenase6e-0960.5
NC_014976:759129:7895937895937925322940Bacillus subtilis BSn5 chromosome, complete genomeputative oxidoreductase8e-0960.1
NC_015957:8677395:8705383870538387077792397Streptomyces violaceusniger Tu 4113 chromosome, complete genomemolybdopterin oxidoreductase1e-0859.7
NC_019940:1727384:1744669174466917475602892Thioflavicoccus mobilis 8321 chromosome, complete genomeanaerobic dehydrogenase1e-0859.3
NC_007907:5404608:5407969540796954101432175Desulfitobacterium hafniense Y51, complete genomeputative anaerobic dehydrogenase2e-0859.3
NC_011773:3399531:3413158341315834160972940Bacillus cereus AH820 chromosome, complete genomemolybdopterin oxidoreductase family protein2e-0858.9
NC_009454:2801808:2807349280734928096522304Pelotomaculum thermopropionicum SI, complete genomeanaerobic dehydrogenases2e-0858.9
NC_013165:647894:6487246487246516632940Slackia heliotrinireducens DSM 20476, complete genomeanaerobic dehydrogenase, typically selenocysteine-containing2e-0858.9
NC_012440:609659:6206306206306239053276Persephonella marina EX-H1, complete genomemolybdopterin oxidoreductase3e-0858.5
NC_014844:1270618:1307313130731313100032691Desulfovibrio aespoeensis Aspo-2 chromosome, complete genomeTrimethylamine-N-oxide reductase (cytochrome c)3e-0858.5
NC_017191:3901914:3924832392483239268352004Bacillus amyloliquefaciens XH7 chromosome, complete genomeoxidoreductase3e-0858.5
NC_005945:3321600:3334131333413133370702940Bacillus anthracis str. Sterne, complete genomemolybdopterin oxidoreductase family protein2e-0858.5
NC_007530:3321033:3333564333356433365032940Bacillus anthracis str. 'Ames Ancestor', complete genomemolybdopterin oxidoreductase family protein2e-0858.5
NC_003997:3320906:3333437333343733363762940Bacillus anthracis str. Ames, complete genomemolybdopterin oxidoreductase family protein2e-0858.5
NC_012581:897957:9022389022389051772940Bacillus anthracis str. CDC 684 chromosome, complete genomemolybdopterin oxidoreductase family protein2e-0858.5
NC_012659:3320933:3333464333346433364032940Bacillus anthracis str. A0248, complete genomemolybdopterin oxidoreductase family protein2e-0858.5
NC_014323:3292082:3296449329644932992172769Herbaspirillum seropedicae SmR1 chromosome, complete genomeassimilatory nitrate reductase large subunit3e-0858.2
NC_015578:1038588:1065082106508210672802199Treponema primitia ZAS-2 chromosome, complete genomeformate dehydrogenase subunit alpha5e-0857.8
NC_012438:1301960:1306776130677613099913216Sulfurihydrogenibium azorense Az-Fu1 chromosome, complete genomemolybdopterin oxidoreductase4e-0857.8
NC_021184:592501:6087126087126107752064Desulfotomaculum gibsoniae DSM 7213, complete genomeanaerobic dehydrogenase, typically selenocysteine-containing5e-0857.4
UCMB5137:1594000:1599629159962916016862058Bacillus atrophaeus UCMB-5137molybdopterin cofactor oxido-reductase5e-0857.4
NC_015703:1898159:1898159189815919002762118Runella slithyformis DSM 19594 chromosome, complete genomeNitrate reductase6e-0857.4
NC_014166:716000:7268457268457290972253Arcobacter nitrofigilis DSM 7299 chromosome, complete genomeformate dehydrogenase subunit alpha6e-0857.4
NC_009725:3878862:3904179390417939061822004Bacillus amyloliquefaciens FZB42, complete genomeYyaE1e-0756.6
NC_008340:682469:6824696824696847482280Alkalilimnicola ehrlichei MLHE-1, complete genomemolybdopterin oxidoreductase9e-0856.6
NC_011529:766292:7662927662927682021911Thermococcus onnurineus NA1, complete genomemolybdopterin oxidoreductase, molybdopterin-binding subunit9e-0856.6
NC_013959:1723037:1723037172303717259522916Sideroxydans lithotrophicus ES-1 chromosome, complete genomemolybdopterin oxidoreductase1e-0756.2
NC_015737:53682:5368253682564832802Clostridium sp. SY8519, complete genomeanaerobic dehydrogenase1e-0756.2
NC_015387:1803938:1803938180393818067692832Marinithermus hydrothermalis DSM 14884 chromosome, complete genomeNitrate reductase1e-0756.2
NC_019842:3921424:3946953394695339489562004Bacillus amyloliquefaciens subsp. plantarum AS43.3 chromosome,hypothetical protein1e-0756.2
NC_007907:5185510:5226179522617952283982220Desulfitobacterium hafniense Y51, complete genomeputative anaerobic dehydrogenase2e-0755.8
NC_020410:3868573:3895884389588438978872004Bacillus amyloliquefaciens subsp. plantarum UCMB5036 completeputative oxidoreductase2e-0755.8
NC_018664:3073022:3076699307669930793472649Clostridium acidurici 9a chromosome, complete genomeformate dehydrogenase H2e-0755.5
NC_010730:1211506:1229547122954712327683222Sulfurihydrogenibium sp. YO3AOP1, complete genomemolybdopterin oxidoreductase2e-0755.5
NC_021150:2315362:2330808233080823335132706Azotobacter vinelandii CA6, complete genomeassimilatory nitrate reductase, NasB2e-0755.5
NC_012560:2315350:2330796233079623335012706Azotobacter vinelandii DJ, complete genomeassimilatory nitrate reductase, NasB2e-0755.5
NC_019791:1189908:1195724119572411983842661Caldisphaera lagunensis DSM 15908 chromosome, complete genomeformate dehydrogenase subunit alpha3e-0755.1
NC_015565:1075693:1091083109108310931672085Desulfotomaculum carboxydivorans CO-1-SRB chromosome, completenitrate reductase3e-0755.1
NC_014328:773095:7772567772567793852130Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeformate dehydrogenase subunit alpha4e-0754.7
NC_017096:1147441:1153853115385311565672715Caldisericum exile AZM16c01, complete genomeputative formate dehydrogenase subunit alpha4e-0754.7
NC_007947:577315:5855275855275876562130Methylobacillus flagellatus KT, complete genomemolybdopterin oxidoreductase6e-0753.9
NC_011830:1288984:1321043132104313235742532Desulfitobacterium hafniense DCB-2, complete genomemolybdopterin oxidoreductase9e-0753.5
NC_010634:3155741:3177212317721231797042493Yersinia pseudotuberculosis PB1/+, complete genomeperiplasmic nitrate reductase, large subunit9e-0753.5
NC_006155:3237990:3259701325970132621932493Yersinia pseudotuberculosis IP 32953, complete genomeperiplasmic nitrate reductase precursor9e-0753.5
NC_011830:1504497:1504497150449715071782682Desulfitobacterium hafniense DCB-2, complete genomeformate dehydrogenase, alpha subunit9e-0753.5
NC_010694:1932126:1948815194881519514812667Erwinia tasmaniensis, complete genomeNitrate reductase8e-0753.5
NC_014551:2057971:2080549208054920826032055Bacillus amyloliquefaciens DSM 7, complete genomemolybdopterin cofactor oxido-reductase8e-0753.5
NC_012115:1415827:1421966142196614246202655Nautilia profundicola AmH, complete genomeputative polysulfide reductase chain A8e-0753.5
NC_015711:1086000:1087142108714210893552214Myxococcus fulvus HW-1 chromosome, complete genomemolybdopterin-binding oxidoreductase1e-0653.1
NC_015738:1858455:1866770186677018696132844Eggerthella sp. YY7918, complete genomeanaerobic dehydrogenase1e-0653.1
NC_015562:755785:7764957764957785732079Methanotorris igneus Kol 5 chromosome, complete genomeformate dehydrogenase subunit alpha1e-0653.1
NC_011296:1086223:1101038110103811031252088Thermodesulfovibrio yellowstonii DSM 11347, complete genomethiosulfate reductase2e-0652.8
NC_013204:2826500:2873403287340328761322730Eggerthella lenta DSM 2243, complete genomemolybdopterin oxidoreductase1e-0652.8
NC_010501:1868888:1899479189947919023582880Pseudomonas putida W619, complete genomeformate dehydrogenase, alpha subunit1e-0652.8
NC_016584:4601645:4605706460570646076431938Desulfosporosinus orientis DSM 765 chromosome, complete genomeanaerobic dehydrogenase2e-0652.4
NC_016830:3697173:3733283373328337361592877Pseudomonas fluorescens F113 chromosome, complete genomeNAD-dependent formate dehydrogenase subunit alpha2e-0652.4
NC_002939:360462:3728693728693753492481Geobacter sulfurreducens PCA, complete genomeNADH dehydrogenase I, G subunit, putative2e-0652
NC_009802:1827138:1827138182713818294292292Campylobacter concisus 13826, complete genomeputative anaerobic dehydrogenase2e-0652
NC_013421:2972269:2972269297226929747552487Pectobacterium wasabiae WPP163, complete genomeperiplasmic nitrate reductase, large subunit2e-0652
NC_007907:4714844:4714844471484447173812538Desulfitobacterium hafniense Y51, complete genomeputative anaerobic dehydrogenase2e-0652
NC_011094:2115750:2118400211840021206762277Salmonella enterica subsp. enterica serovar Schwarzengrund strthiosulfate reductase4e-0651.6
NC_013887:213699:2256862256862277612076Methanocaldococcus sp. FS406-22 chromosome, complete genomeformate dehydrogenase, alpha subunit3e-0651.6
NC_015738:1971211:1971211197121119738802670Eggerthella sp. YY7918, complete genomeanaerobic dehydrogenase4e-0651.2
NC_010102:931055:9474199474199496952277Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein4e-0651.2
NC_009483:4885914:4899536489953649020222487Geobacter uraniireducens Rf4 chromosome, complete genomemolybdopterin oxidoreductase4e-0651.2
NC_014931:3886405:3904124390412439069972874Variovorax paradoxus EPS chromosome, complete genomeformate dehydrogenase, alpha subunit4e-0651.2
NC_014973:3290545:3292430329243032952102781Geobacter sp. M18 chromosome, complete genomeformate dehydrogenase subunit alpha7e-0650.4
NC_007298:3764048:3764048376404837665612514Dechloromonas aromatica RCB, complete genomeTwin-arginine translocation pathway signal:Periplasmic nitrate reductase, large subunit8e-0650.4