Pre_GI Gene

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Host: NC_011094 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_011094:2115750 Salmonella enterica subsp. enterica serovar Schwarzengrund str

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This serovar is the predominant cause of Salmonellosis in Southeast Asia, a major source of imported food products to the USA. It was also the cause of the first recognized outbreak of fluoroquinolone-resistant salmonellosis in the USA. Recent reports suggest that high-level fluoroquinolone resistance is emerging in S. Schwarzengrund in different parts of the world. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
211575021169221173D-alanyl-D-alanine carboxypeptidaseQuickGO ontologyBLASTP
21170462117810765thiosulfate reductase cytochrome B subunitQuickGO ontologyBLASTP
211780721183855794Fe-4S-binding proteinQuickGO ontologyBLASTP
211840021206762277thiosulfate reductaseQuickGO ontologyBLASTP
212130521236532349secreted effector proteinQuickGO ontologyBLASTP
21238572123979123hypothetical proteinBLASTP
21244842124675192hypothetical proteinBLASTP
21247842125218435hypothetical proteinBLASTP
21255742125717144phage tail assembly proteinQuickGO ontologyBLASTP
21256922126066375hypothetical proteinBLASTP
212611821272511134acetyltransferase family proteinQuickGO ontologyBLASTP
21273272127500174phage geneQuickGO ontologyBLASTP
21274902128065576tail fiber assembly proteinQuickGO ontologyBLASTP
212806521296091545tail proteinQuickGO ontologyBLASTP
21295962130183588tail proteinQuickGO ontologyBLASTP
213018621312651080tail proteinQuickGO ontologyBLASTP
21312582131671414phage protein GP46QuickGO ontologyBLASTP
21316762132209534bacteriophage Mu Gp45 proteinQuickGO ontologyBLASTP
213220921332671059bacteriophage Mu P proteinQuickGO ontologyBLASTP
213326421346041341tailDNA circulation proteinQuickGO ontologyBLASTP
213463821365661929tail proteinQuickGO ontologyBLASTP
21366512136977327hypothetical proteinBLASTP
21369742137330357tail tube proteinQuickGO ontologyBLASTP
213733021388261497bacteriophage Mu tail sheath proteinQuickGO ontologyBLASTP
21388162138980165hypothetical proteinBLASTP