Pre_GI: BLASTP Hits

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Query: NC_011094:2115750:2127490 Salmonella enterica subsp. enterica serovar Schwarzengrund str

Start: 2127490, End: 2128065, Length: 576

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This serovar is the predominant cause of Salmonellosis in Southeast Asia, a major source of imported food products to the USA. It was also the cause of the first recognized outbreak of fluoroquinolone-resistant salmonellosis in the USA. Recent reports suggest that high-level fluoroquinolone resistance is emerging in S. Schwarzengrund in different parts of the world. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010102:931055:940063940063940638576Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein1e-108391
NC_011205:2137696:214882021488202149389570Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853tail fiber assembly protein2e-102371
NC_011294:2009388:202051320205132021082570Salmonella enterica subsp. enterica serovar Enteritidis strphage tail protein2e-102371
NC_016856:2085283:209563220956322096201570Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative tail fiber assembly protein2e-102371
NC_016863:2029340:204382420438242044393570Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1hypothetical protein2e-102371
NC_017046:2026672:204115620411562041725570Salmonella enterica subsp. enterica serovar Typhimurium str. 798bacteriophage tail protein2e-102371
NC_016810:2027311:204179520417952042394600Salmonella enterica subsp. enterica serovar Typhimurium strputative bacteriophage tail protein2e-102370
NC_016857:2027311:204179520417952042121327Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74tail fiber assembly protein3e-54211
NC_007613:1353500:137279113727911373354564Shigella boydii Sb227, complete genomeputative tail fiber assembly protein1e-31135
NC_007712:1182518:119294511929451193556612Sodalis glossinidius str. 'morsitans', complete genomehypothetical protein7e-28123
NC_010102:1779707:180070718007071801114408Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein4e-25114
NC_003198:4453457:448272144827214483128408Salmonella enterica subsp. enterica serovar Typhi str. CT18,putative phage tail fibre protein3e-25114
NC_010102:1829357:184176318417631842170408Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein2e-24111
NC_012751:899394:915111915111915647537Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum), completephage tail assembly chaperone9e-24109
NC_011740:621408:625989625989626549561Escherichia fergusonii ATCC 35469, complete genomehypothetical protein from phage origin7e-2096.7
NC_006905:2355290:235775923577592358163405Salmonella enterica subsp. enterica serovar Choleraesuis strbacteriophage tail fiber assembly protein (pseudogene)5e-1890.9
NC_007613:1353500:137222913722291372762534Shigella boydii Sb227, complete genomeputative tail fiber assembly protein2e-1479
NC_011294:1006630:101675710167571017338582Salmonella enterica subsp. enterica serovar Enteritidis strphage tail fiber assembly protein2e-1169.3
NC_011205:1107998:111738411173841117965582Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853tail fiber assembly like-protein2e-1169.3
NC_011274:1299475:130654113065411307110570Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91phage tail fiber assembly protein2e-1168.6
NC_011205:1391971:139546013954601396029570Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853phage tail assembly protein2e-1168.6
NC_011294:1220526:124264112426411242934294Salmonella enterica subsp. enterica serovar Enteritidis str2e-1065.5
NC_014228:3282500:331458733145873315018432Xenorhabdus nematophila ATCC 19061, complete genomehypothetical protein1e-0963.2
NC_010102:683444:710448710448710975528Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein2e-0962.4
NC_003197:2327474:233483423348342335361528Salmonella typhimurium LT2, complete genomeputative phage tail fiber assembly protein2e-0962.4
NC_016810:2325190:233255023325502333077528Salmonella enterica subsp. enterica serovar Typhimurium strputative bacteriophage tail fiber assembly protein2e-0962.4
NC_016856:2379027:238638723863872386914528Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative phage tail fiber assembly protein2e-0962.4
NC_016857:2325190:233255023325502333077528Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative phage tail fiber assembly protein2e-0962.4
NC_016860:2323017:233037723303772330904528Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein2e-0962.4
NC_016863:2324293:233457923345792335106528Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative phage tail fiber assembly protein2e-0962.4
NC_017046:2324554:233191423319142332441528Salmonella enterica subsp. enterica serovar Typhimurium str. 798bacteriophage tail fiber assembly protein2e-0962.4
NC_009800:2788164:279908627990862799670585Escherichia coli HS, complete genometail fiber assembly protein4e-0961.2
NC_004631:685357:703886703886704341456Salmonella enterica subsp. enterica serovar Typhi Ty2, complete4e-0961.2
NC_003198:2297837:230037223003722300827456Salmonella enterica subsp. enterica serovar Typhi str. CT18,bacteriophage tail fiber assembly protein (pseudogene)4e-0961.2
NC_011415:644811:652003652003652578576Escherichia coli SE11 chromosome, complete genomeputative phage tail assembly protein4e-0961.2
NC_011083:2375061:238241423824142382941528Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,putative phage tail fiber assembly protein5e-0960.8
AC_000091:558920:580757580757581320564Escherichia coli W3110 DNA, complete genome7e-0960.5
NC_000913:558920:580757580757581320564Escherichia coli K12, complete genomeDLP12 prophage; predicted tail fiber assembly protein (pseudogene)7e-0960.5
NC_010473:623810:633475633475633912438Escherichia coli str. K-12 substr. DH10B, complete genome6e-0960.5
NC_010473:498252:520215520215520652438Escherichia coli str. K-12 substr. DH10B, complete genome6e-0960.5
NC_011274:2325840:232854423285442328834291Salmonella enterica subsp. enterica serovar Gallinarum str. 287/916e-0960.5
NC_013361:649518:657331657331657903573Escherichia coli O26:H11 str. 11368 chromosome, complete genometail fiber assembly protein8e-0960.1
NC_012759:1517500:152439315243931524968576Escherichia coli BW2952 chromosome, complete genomeQin prophage; tail fiber assembly protein8e-0960.1
NC_000913:1625500:163233416323341632909576Escherichia coli K12, complete genomeQin prophage; predicted tail fibre assembly protein8e-0960.1
AC_000091:1627049:163602416360241636599576Escherichia coli W3110 DNA, complete genomepredicted tail fibre assembly protein8e-0960.1
NC_010473:1712984:172195917219591722534576Escherichia coli str. K-12 substr. DH10B, complete genomeQin prophage; predicted tail fibre assembly protein8e-0960.1
NC_011740:2737467:275506527550652755649585Escherichia fergusonii ATCC 35469, complete genomeputative tail fibre chaperone; Qin prophage2e-0858.9
NC_013941:733286:740261740261740845585Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeTail fiber assembly protein2e-0858.9
NC_013353:604719:611775611775612338564Escherichia coli O103:H2 str. 12009, complete genometail fiber assembly protein3e-0858.5
AP010958:604719:611775611775612338564Escherichia coli O103:H2 str. 12009 DNA, complete genomeputative tail fiber assembly protein3e-0858.5
NC_011080:2722492:273336927333692733947579Salmonella enterica subsp. enterica serovar Newport str. SL254,phage tail assembly protein3e-0858.2
NC_003197:2720726:273333727333372733915579Salmonella typhimurium LT2, complete genomephage tail assembly-like protein3e-0858.2
NC_016810:2719779:273102427310242731602579Salmonella enterica subsp. enterica serovar Typhimurium strDNA Binding protein3e-0858.2
NC_016856:2773995:278486627848662785444579Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sphage tail assembly-like protein3e-0858.2
NC_016857:2719779:273102427310242731602579Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74phage tail assembly-like protein3e-0858.2
NC_016860:2716152:272874527287452729323579Salmonella enterica subsp. enterica serovar Typhimurium strphage tail assembly protein3e-0858.2
NC_016863:2721826:273307127330712733649579Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1phage tail assembly-like protein3e-0858.2
NC_017046:2717810:273040327304032730981579Salmonella enterica subsp. enterica serovar Typhimurium str. 798DNA Binding protein3e-0858.2
NC_004337:309833:324465324465324899435Shigella flexneri 2a str. 301, complete genomeputative phage tail fibre protein4e-0857.8
NC_011751:1377457:139651413965141397098585Escherichia coli UMN026 chromosome, complete genomeputative tail fiber chaperone; Qin prophage5e-0857.4
NC_016856:1326503:132894413289441329528585Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sphage tail assembly-like protein9e-0856.6
NC_011094:1923870:1940354194035419416821329Salmonella enterica subsp. enterica serovar Schwarzengrund strside tail fiber protein9e-0856.6
NC_008258:269806:274041274041274544504Shigella flexneri 5 str. 8401, complete genomehypothetical protein2e-0755.5
NC_008258:2045000:205388620538862054155270Shigella flexneri 5 str. 8401, complete genomehypothetical bacteriophage protein5e-0754.3
NC_004741:2009769:202189520218952022164270Shigella flexneri 2a str. 2457T, complete genomeputative bacteriophage protein5e-0754.3
NC_017328:2090679:210082021008202101089270Shigella flexneri 2002017 chromosome, complete genomeputative bacteriophage protein5e-0754.3
NC_011094:688626:688626688626689144519Salmonella enterica subsp. enterica serovar Schwarzengrund strbacteriophage tail protein5e-0754.3
NC_011147:1057259:106548110654811065651171Salmonella enterica subsp. enterica serovar Paratyphi A str5e-0753.9
NC_003198:1867456:188947118894711889989519Salmonella enterica subsp. enterica serovar Typhi str. CT18,putative bacteriophage tail protein8e-0753.5
NC_016856:1957263:1974881197488119759391059Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sphage side tail fiber assembly protein1e-0653.1
NC_006905:1342474:134886413488641349382519Salmonella enterica subsp. enterica serovar Choleraesuis strhypothetical prophage protein1e-0652.8
NC_012880:2480000:248311324831132483727615Dickeya dadantii Ech703, complete genometail assembly chaperone gp381e-0652.8
NC_003197:1945858:196347619634761964357882Salmonella typhimurium LT2, complete genomephage-tail assembly-like protein2e-0652.4
NC_016810:1903426:192104419210441921925882Salmonella enterica subsp. enterica serovar Typhimurium strPhage Tail Assembly Protein2e-0652.4
NC_016857:1903426:192104419210441921925882Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74phage-tail assembly-like protein2e-0652.4
NC_016863:1905454:192307219230721923953882Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1phage-tail assembly-like protein2e-0652.4
NC_017046:1902788:192040719204071921288882Salmonella enterica subsp. enterica serovar Typhimurium str. 798Phage Tail Assembly Protein2e-0652.4
NC_011083:1993672:201249820124982012734237Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,putative Tail fiber assembly protein homolog from lambdoid prophage3e-0651.6
NC_011080:1166951:117352511735251174052528Salmonella enterica subsp. enterica serovar Newport str. SL254,caudovirales tail fibre assembly protein3e-0651.6
NC_011080:1944226:196848219684821969363882Salmonella enterica subsp. enterica serovar Newport str. SL254,caudovirales tail fibre assembly protein5e-0650.8
NC_004431:1352906:137255413725541372820267Escherichia coli CFT073, complete genomeHypothetical protein ylcE8e-0650.4