Pre_GI: BLASTP Hits

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Query: NC_011094:2115750:2133264 Salmonella enterica subsp. enterica serovar Schwarzengrund str

Start: 2133264, End: 2134604, Length: 1341

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This serovar is the predominant cause of Salmonellosis in Southeast Asia, a major source of imported food products to the USA. It was also the cause of the first recognized outbreak of fluoroquinolone-resistant salmonellosis in the USA. Recent reports suggest that high-level fluoroquinolone resistance is emerging in S. Schwarzengrund in different parts of the world. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017046:2026672:2046943204694320482831341Salmonella enterica subsp. enterica serovar Typhimurium str. 798bacteriophage protein0840
NC_011205:2137696:2154605215460521559451341Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853tail/DNA circulation protein0840
NC_016810:2027311:2047582204758220489221341Salmonella enterica subsp. enterica serovar Typhimurium strbacteriophage protein0840
NC_016856:2085283:2101419210141921027591341Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Shypothetical protein0840
NC_016857:2027311:2047582204758220489221341Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74tail/DNA circulation protein0840
NC_016863:2029340:2049611204961120509511341Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1hypothetical protein0840
NC_010102:1779707:1805867180586718072071341Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein0839
NC_011294:2009388:2026299202629920276391341Salmonella enterica subsp. enterica serovar Enteritidis strhypothetical protein0834
NC_011740:621408:6200836200836214111329Escherichia fergusonii ATCC 35469, complete genomeTail/DNA circulation protein4e-121435
NC_008258:269806:2684812684812698091329Shigella flexneri 5 str. 8401, complete genometail/DNA circulation protein3e-120432
NC_008563:2909945:2926925292692529282951371Escherichia coli APEC O1, complete genomebacteriophage V tail/DNA circulation protein5e-120431
NC_011742:2823000:2844235284423528456051371Escherichia coli S88 chromosome, complete genomeTail/DNA circulation protein5e-120431
NC_007946:2894793:2911898291189829132531356Escherichia coli UTI89, complete genomebacteriophage V tail/DNA circulation protein4e-120431
NC_011750:2928990:2943722294372229450921371Escherichia coli IAI39 chromosome, complete genometail/DNA circulation protein3e-118425
NC_009436:2776410:2793652279365227949681317Enterobacter sp. 638, complete genomeDNA circulation family protein2e-114412
NC_007712:1182518:1198296119829611996211326Sodalis glossinidius str. 'morsitans', complete genomephage tail/DNA circulation protein2e-111403
NC_012751:899394:9096879096879109881302Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum), completeMu-like prophage DNA circulation protein7e-30132
NC_002937:2933000:2955218295521829564171200Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, completetail/DNA circulation protein, putative6e-26119
NC_014228:3282500:3307784330778433091841401Xenorhabdus nematophila ATCC 19061, complete genomeputative DNA circulation protein1e-1895.1
NC_000907:1568867:1585613158561315869801368Haemophilus influenzae Rd KW20, complete genome64 kDa virion protein2e-1894
NC_012721:2694829:2718174271817427195441371Burkholderia glumae BGR1 chromosome 2, complete genomeDNA circulation-like protein1e-1585.1
NC_008014:112000:1291051291051303701266Lawsonia intracellularis PHE/MN1-00 plasmid 3, complete sequencehypothetical protein5e-1582.8
NC_002927:3827211:3840746384074638420051260Bordetella bronchiseptica RB50, complete genomehypothetical protein4e-1376.3
NC_017243:1734179:1734179173417917354291251Brachyspira intermedia PWS/A chromosome, complete genomeDNA circulation family protein8e-1065.5