Pre_GI: BLASTP Hits

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Query: NC_011094:2115750:2128065 Salmonella enterica subsp. enterica serovar Schwarzengrund str

Start: 2128065, End: 2129609, Length: 1545

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This serovar is the predominant cause of Salmonellosis in Southeast Asia, a major source of imported food products to the USA. It was also the cause of the first recognized outbreak of fluoroquinolone-resistant salmonellosis in the USA. Recent reports suggest that high-level fluoroquinolone resistance is emerging in S. Schwarzengrund in different parts of the world. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016863:2029340:2044393204439320459551563Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1phage tail-like protein0950
NC_016856:2085283:2096201209620120977631563Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Shypothetical protein0950
NC_011205:2137696:2149389214938921509511563Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853tail protein0950
NC_016810:2027311:2042364204236420439591596Salmonella enterica subsp. enterica serovar Typhimurium strputative bacteriophage tail fiber protein0949
NC_017046:2026672:2041725204172520432871563Salmonella enterica subsp. enterica serovar Typhimurium str. 798bacteriophage tail fiber protein0948
NC_016857:2027311:2042364204236420439261563Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74tail protein0948
NC_011294:2009388:2021082202108220226441563Salmonella enterica subsp. enterica serovar Enteritidis strphage tail fiber protein0947
NC_010102:931055:9380129380129400632052Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein0704
NC_006905:1342474:1346171134617113488492679Salmonella enterica subsp. enterica serovar Choleraesuis strside tail fiber protein1e-158560
NC_010102:1779707:1801118180111818022121095Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein7e-67255
NC_003198:1867456:1890004189000418915151512Salmonella enterica subsp. enterica serovar Typhi str. CT18,putative bacteriophage tail protein2e-63243
NC_005815:61148:2928292858642937Yersinia pestis biovar Microtus str. 91001 plasmid pMT1, completephage lambda-related protein8e-58225
NC_016857:2325190:2333080233308023343811302Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74hypothetical protein5e-54212
NC_017046:2324554:2332444233244423337451302Salmonella enterica subsp. enterica serovar Typhimurium str. 798bacteriophage protein5e-54212
NC_011083:2375061:2382944238294423841851242Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,hypothetical protein5e-54212
NC_003197:2327474:2335364233536423366051242Salmonella typhimurium LT2, complete genomehypothetical protein5e-54212
NC_010102:683444:7092047092047104451242Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein5e-54212
NC_016810:2325190:2333080233308023343211242Salmonella enterica subsp. enterica serovar Typhimurium strbacteriophage protein5e-54212
NC_016856:2379027:2386917238691723881581242Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Shypothetical protein5e-54212
NC_016860:2323017:2330907233090723321481242Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein5e-54212
NC_016863:2324293:2335109233510923363501242Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1hypothetical protein5e-54212
NC_011080:1166951:1171987117198711735191533Salmonella enterica subsp. enterica serovar Newport str. SL254,side tail fiber protein6e-41169
AP010958:604719:6088486088486117632916Escherichia coli O103:H2 str. 12009 DNA, complete genomeputative side tail fiber protein1e-40168
NC_013353:604719:6088486088486117632916Escherichia coli O103:H2 str. 12009, complete genomeside tail fiber protein1e-40168
NC_013361:649518:6543596543596573192961Escherichia coli O26:H11 str. 11368 chromosome, complete genomeside tail fiber protein9e-41168
NC_013941:733286:7374277374277402612835Escherichia coli O55:H7 str. CB9615 chromosome, complete genomePPE-repeat protein7e-41168
NC_011415:644811:6490376490376520032967Escherichia coli SE11 chromosome, complete genomehypothetical protein1e-40167
NC_007613:1353500:1373323137332313754732151Shigella boydii Sb227, complete genomeputative bacteriophage tail protein4e-38159
NC_007712:1182518:1193473119347311945671095Sodalis glossinidius str. 'morsitans', complete genomeputative phage tail protein1e-32141
NC_009778:1556222:1586491158649115876721182Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein8e-23108
NC_004337:309833:324871324871325521651Shigella flexneri 2a str. 301, complete genomehypothetical bacteriophage protein3e-20100
NC_004741:310382:316401316401317051651Shigella flexneri 2a str. 2457T, complete genomehypothetical bacteriophage protein3e-20100
NC_009436:2776410:278929127892912789980690Enterobacter sp. 638, complete genomehypothetical protein5e-2099.4
AC_000091:1191353:120907812090781209707630Escherichia coli W3110 DNA, complete genomehypothetical protein2e-1997.4
NC_000913:1188999:120672412067241207353630Escherichia coli K12, complete genomee14 prophage; predicted protein2e-1997.4
NC_011740:621408:625084625084626013930Escherichia fergusonii ATCC 35469, complete genomehypothetical protein from phage origin4e-1996.7
NC_011742:2823000:283981928398192840562744Escherichia coli S88 chromosome, complete genomephage tail protein9e-1995.5
NC_007946:2894793:290748229074822908225744Escherichia coli UTI89, complete genomehypothetical protein9e-1995.5
NC_011750:2928990:293909929390992940049951Escherichia coli IAI39 chromosome, complete genomehypothetical protein1e-1894.7
NC_002937:255790:2597392597392607551017Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, completetail fiber protein, putative3e-1273.9
NC_012751:899394:914405914405915106702Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum), completephage tail collar domain protein1e-0964.7
NC_002937:2933000:295033129503312951146816Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, completetail fiber protein, putative2e-0964.3
NC_003198:2297837:230113623011362301918783Salmonella enterica subsp. enterica serovar Typhi str. CT18,4e-0756.6
NC_016810:2325190:234163623416362342463828Salmonella enterica subsp. enterica serovar Typhimurium str6e-0756.2
NC_011080:2342672:234570623457062346548843Salmonella enterica subsp. enterica serovar Newport str. SL254,side tail fiber protein6e-0756.2
NC_006905:2355290:235820423582042358995792Salmonella enterica subsp. enterica serovar Choleraesuis strputative tail fiber protein of phage7e-0755.8
NC_011083:2375061:239150023915002392291792Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,7e-0755.8
NC_010102:683444:701098701098701889792Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein7e-0755.8
NC_003197:2327474:234392023439202344711792Salmonella typhimurium LT2, complete genomeputative tail fiber protein of phage7e-0755.8
NC_016832:687000:703004703004703795792Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Side tail fiber protein7e-0755.8
NC_016856:2379027:239547323954732396264792Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative tail fiber protein of phage7e-0755.8
NC_016857:2325190:234163623416362342427792Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74side tail fiber protein7e-0755.8
NC_016860:2323017:233946323394632340254792Salmonella enterica subsp. enterica serovar Typhimurium strside tail fiber protein7e-0755.8
NC_016863:2324293:234366523436652344456792Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative tail fiber protein of phage7e-0755.8
NC_017046:2324554:234100023410002341791792Salmonella enterica subsp. enterica serovar Typhimurium str. 7987e-0755.8
NC_012125:1517925:153561915356191536410792Salmonella enterica subsp. enterica serovar Paratyphi C straintail fiber protein of phage6e-0755.8
NC_016831:1690811:170987217098721710468597Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein1e-0654.7
NC_011094:1923870:1940354194035419416821329Salmonella enterica subsp. enterica serovar Schwarzengrund strside tail fiber protein2e-0654.3
NC_010102:1137247:115424311542431154773531Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein2e-0654.3
NC_003198:4453457:4483135448313544847541620Salmonella enterica subsp. enterica serovar Typhi str. CT18,probable phage tail fibre protein3e-0653.5