Pre_GI Gene

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Host: NC_011353 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_011353:1971145 Escherichia coli O157:H7 str. EC4115 chromosome, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain is associated with Hamburger disease, which is caused by the contamination of meat products by enterohemorrhagic E. coli (EHEC). The identifier O157:H7 refers to the serotype of EHEC, and reflects the specific antigenic markers found on the surface of the cell. EHEC attaches and effaces to cells in the large intestine. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
197114519726891545nitrate reductase 2 subunit betaQuickGO ontologyBLASTP
197268619764263741nitrate reductase 2 subunit alphaQuickGO ontologyBLASTP
197650819778961389nitrite extrusion protein 2QuickGO ontologyBLASTP
197820219794611260leucine-rich repeat proteinQuickGO ontologyBLASTP
198095119820511101gram-negative porin family proteinQuickGO ontologyBLASTP
19823101983191882hypothetical proteinBLASTP
19864891987367879formate dehydrogenase nitrate-inducible iron-sulfur subunitQuickGO ontologyBLASTP
19873601988013654formate dehydrogenase-N subunit gammaQuickGO ontologyBLASTP
19882411988525285HigA family addiction module antidote proteinQuickGO ontologyBLASTP
198867119896811011alcohol dehydrogenaseQuickGO ontologyBLASTP
198981519915121698malate dehydrogenaseQuickGO ontologyBLASTP
1991669199180613830S ribosomal subunit S22QuickGO ontologyBLASTP
19919081992123216biofilm-dependent modulation proteinQuickGO ontologyBLASTP
19924681992899432peroxiredoxin OsmCQuickGO ontologyBLASTP
19929551993881927ABC transporter ATP-binding proteinQuickGO ontologyBLASTP
19938741994860987ABC transporter ATP-binding proteinQuickGO ontologyBLASTP
19948571995753897ATP-dependent peptide transporter membrane subunitQuickGO ontologyBLASTP
199575019967721023inner membrane ABC transporter permease yddRQuickGO ontologyBLASTP