Pre_GI Gene

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Host: NC_010498 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_010498:1700447 Escherichia coli SMS-3-5, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Escherichia coli SMS-3-5 was isolated from a toxic-metal contaminated site, Shipyard Creek, Charleston, South Carolina, USA. This strain is highly resistant to a number of antibiotics. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
16998011700454654formate dehydrogenase gamma subunitQuickGO ontologyBLASTP
17004471701331885formate dehydrogenase nitrate-inducible iron-sulfur subunitQuickGO ontologyBLASTP
170134417043913048formate dehydrogenase nitrate inducible alpha subunit selenocysteine-containingQuickGO ontologyBLASTP
17046231705504882hypothetical proteinBLASTP
170576217068621101porin family proteinQuickGO ontologyBLASTP
170703217082911260hypothetical proteinBLASTP
170835417096101257hypothetical proteinBLASTP
170992017113081389nitrite extrusion protein 2QuickGO ontologyBLASTP
171140317151433741nitrate reductase 2 alpha subunitQuickGO ontologyBLASTP
171514017166841545nitrate reductase 2 beta subunitQuickGO ontologyBLASTP
17166841717379696nitrate reductase molybdenum cofactor assembly chaperone 2QuickGO ontologyBLASTP
17173761718056681respiratory nitrate reductase 2 gamma subunitQuickGO ontologyBLASTP
17181361719029894PhzF family phenazine biosynthesis proteinQuickGO ontologyBLASTP